YALI0D08734g

Overview

Description weakly similar to uniprot|P06843 Saccharomyces cerevisiae YER161c SPT2 multifunctional HMG-like chromatin protein
Locus type CDS
Locus tag YALI0D08734g

Location

Species Yarrowia lipolytica Positions 1120157..1121231
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1075 (nuc.)
Previous locus YALI0D08712g Next locus YALI0D08756g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08734g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08734gYALI0D08734g_mRNA-001YALI0D08734g_CDS-001

Nucleotide sequence

 

>YALI0D08734g
ATGCCTGTGAGGCGCTCTTCGGAGCCTGAAAAGAAGCCCACGAACGGCTCCAGCGCAAAA
CCTGCTGCGTCTTCATCTTCATCTTCGGCTGCGATTCCTGTAGCGCGCCAGACTGAGGCG
GAGCGCCGAGAGCAGATGGAGCGAGTCATGCGTCTCAAAGCACAGCGGGCGGCCGAGCGA
GCGGAGAAGATGGAGAAGGAGGGCAAGACCCCGAAGAAGAAACCTGCTACACCCAGGAAA
AAGACGACAACTACTTCCTCAAGCACTGCTAGAGACACAAACACCAGCGCCACCGCGTCA
AACACCTCGACTCGAAGAGGACCCGGCAGAGGTGCCAGTGGTGGCGGACGGGTGTATGAG
GCTCCGCCAGCAAAGCCCCGTAAGAAAATGAGCTTCAAGGAGTTGATGCAGGAGGCAGAC
AATATCAAGGCCGATGATCTCAAGATCGGAATCAAGGTGGCCAAAAAGAAGGAGGTCGCC
AAAGAGCGGGAGCGGGAGAAAGGAGCTAGCGGATCGGGAGAGCGAGAAGCTCGTGCTTCT
CCCAGTGTTGGAGGTCGACCTGGAGCCACAGCTAGAGGTACTCCCTCCAAGCCCTCCAGA
TCTGATCGACCTACGCCTTCGGACCGCCCCACTGCTGGAAAACGACCACCTTCCACTGCC
ATTCCTGAATATAAGCCTCCTTCGACTTTCAACAAGCCCAAGGAGGAACTGCTGAGAAAA
CGAAGACGATATGACGAGGAAGAAGACGATAGCATGGACGACTTCATCGACGAAGATGAA
GAGGAGGAACAACACAGAGATGTGGGATACGACCGAGACGAAATCTGGAGACTCTTGAAC
CGTGGCCGGTCCAGACAGCAGTACTACAACGACTACTCGGACGACGATGACATGGAGGCT
GGAGGAGATGATATCTTTGAGGAGGAGGAACGAAGTAGCAAGCTGGCGCGACTGGAAGAT
CGACGGGAGGAGATGGAGGAGAAACGACGGGCCGAGGAGAAACGACGTCGTCTGGGAAAG
CGGTAGACGCATAACCGCAGTAGCATACATAGCATTAACTTATTGTCACACCTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08734g_CDS-001

Protein length: 342 aa.
Product: Conserved hypothetical protein

>YALI0D08734g_CDS-001 MPVRRSSEPEKKPTNGSSAKPAASSSSSSAAIPVARQTEAERREQMERVMRLKAQRAAER
AEKMEKEGKTPKKKPATPRKKTTTTSSSTARDTNTSATASNTSTRRGPGRGASGGGRVYE
APPAKPRKKMSFKELMQEADNIKADDLKIGIKVAKKKEVAKEREREKGASGSGEREARAS
PSVGGRPGATARGTPSKPSRSDRPTPSDRPTAGKRPPSTAIPEYKPPSTFNKPKEELLRK
RRRYDEEEDDSMDDFIDEDEEEEQHRDVGYDRDEIWRLLNRGRSRQQYYNDYSDDDDMEA
GGDDIFEEEERSSKLARLEDRREEMEEKRRAEEKRRRLGKR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG