YALI0D08712g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D08712g

Location

Species Yarrowia lipolytica Positions 1117570..1119031
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1462 (nuc.)
Previous locus YALI0D08690g Next locus YALI0D08734g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08712g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08712gYALI0D08712g_mRNA-001YALI0D08712g_CDS-001

Nucleotide sequence

 

>YALI0D08712g
ATGCCACCAAAAAGCGAGATTGACGACGAGACCAAGAAGAAGCAGTTGGTGTCTATTCTT
GCGGCGCTGGAGAAGGCGCCCATTAAGGCAACTCCCGCTGGAATCCGGAAATTGGCCCAG
CAGCGGGGCCTCGAAGTTTTCGGAGAAGATTTGGCGGAAGGAACACGAATCTCCCTCGGA
GGATCGACTATCCTCATTGATATCGACATGATCACCAGTCCAATCGACAGGGTGGTGCGT
GTGAACTTCTCTGTGGACGCCAAGGTGGCTCCTTCGGATCCCATACACTCCTACACGAAC
CCTGAGATCTCTCCGTCAATCAACGACGTTCTGCTGTCATCTTTGCAGGCTTCCAAGCTG
GACAAGTTTGCGCGACACCTCGCCTTTCTTTCAGACATGGAGCGTCTATCGTCTGAGAAA
TGCAACTCTTTCAGAGCCATTGATGAGGTGGCCCATGCTCTATTCTTCAAGTACAAGAAG
CTGGGCAAGAAGGATTCACCTGCGGACTTTTGCATGGGCTTTGGACAGCCGCTGCTCAAC
TACGAAGAGAATTTGGGTCTGTTTCTCAAGTACTGGACTACCCAGCACCAAGTGAGAGAC
GCAGAAAAAGCTGCAGTTACTGCTGAGTATATTGCCGAGTTTGGATTGCGAGAGAACTCA
GGAGACTGCCATGCAAAGTACTCCACTGGATGGATCAACGAGGGCGGAGAGTGGCAAGAG
ATTGCTGCTCAGGATAGCACCGCTGAGTTTGTGCTGAGACTCAATCCTCCGGTGCTGATG
AACAAAGACCTGGCCACCAAGCTGGGAGCCTCGTACACAGTTGTGGGCAACGATACGCCG
TTCGATCTGCTCGGAAATACCTTTTACCGATCGTTCCGGGAAGTTCATACATCCGACTCG
GACTCTGTCAGAATGAATGTGGAATACAGCAATCTGGTGGCTAAGGACGAGCTGGTTTCC
GTCACAGAAGTGCCTGTGGACCACCCGCGATCGCTGGAGTCGCTCTTTGACATTCTGCGG
ACCCAGATCCAGCTGTCGACGGTGCTGGAGTCGGTTCTCATCAAGGATTCCATGGTGGGA
CAGGAAGAACTGGATACAAACGACAATGTGCTTGTCGAGGAGCTTCTCAATGCTGGCCCC
GTGGTGCAGCATGCTGATGAGGGCCAACGGCTGCCTTTGACGGTGTCTCTAGGTGATAAC
AACGGTTTACTGAGTCTGTCTGTTGAGGTGCATGCCTGGAAGACGTGGTTTGATGTGGTG
ATTGACAAGAACAAGCTGGTGCTTACAAATCTGCAGGCATCGCCGGGATCCACTACTTTG
GAGGTTGCGCGGTTTGGAAAGCTCATCAACTTTTCCGAAGATCTGGCTCTCAGCATTCTC
CTTGCCAAAAACACAACAAAACCTAACTAATTTATACCATGTACATTATATAGACCTATT
TGCATGTCTATGACTTGAGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08712g_CDS-001

Protein length: 470 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D08712g_CDS-001 MPPKSEIDDETKKKQLVSILAALEKAPIKATPAGIRKLAQQRGLEVFGEDLAEGTRISLG
GSTILIDIDMITSPIDRVVRVNFSVDAKVAPSDPIHSYTNPEISPSINDVLLSSLQASKL
DKFARHLAFLSDMERLSSEKCNSFRAIDEVAHALFFKYKKLGKKDSPADFCMGFGQPLLN
YEENLGLFLKYWTTQHQVRDAEKAAVTAEYIAEFGLRENSGDCHAKYSTGWINEGGEWQE
IAAQDSTAEFVLRLNPPVLMNKDLATKLGASYTVVGNDTPFDLLGNTFYRSFREVHTSDS
DSVRMNVEYSNLVAKDELVSVTEVPVDHPRSLESLFDILRTQIQLSTVLESVLIKDSMVG
QEELDTNDNVLVEELLNAGPVVQHADEGQRLPLTVSLGDNNGLLSLSVEVHAWKTWFDVV
IDKNKLVLTNLQASPGSTTLEVARFGKLINFSEDLALSILLAKNTTKPN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG