YALI0D08470g

Overview

Description weakly similar to uniprot|P47150 Saccharomyces cerevisiae YJR113C Putative 40S ribosomal protein
Locus type CDS
Locus tag YALI0D08470g

Location

Species Yarrowia lipolytica Positions 1086336..1087423
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1088 (nuc.)
Previous locus YALI0D08448g Next locus YALI0D08492g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08470g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08470gYALI0D08470g_mRNA-001YALI0D08470g_CDS-001

Nucleotide sequence

 

>YALI0D08470g
ATGCTGAGAACGACTTCAGGACTAGCTCGGTTCTCCGCCCGTCGCGGATACGCCTCGGCG
TCGCCCGCCAAGATCCTGGTGGGTCTGAACGTGCGAGCAGACCGATTTGACGGCGACCAG
AAGGCCCTTGCCCAGGAGCTGGCCGTCAACTCCGATCTGGGTGAGGAGGACACAGACGCT
ATTGCTGCCAAGTACACGGAGCGAATCAAGGCCAACGCCGTAAAGCCCATTGCTCCCGAG
ACCGCCGAGGGCCATGCTCGACAGTGGATTGCTCTGTTGGACGACATCAAGGCCAAGAGC
ATGTCGACCGAAAAGTTTGAGGGTAAGGACGCTCTGGACATGCAAAAGTTCCGAGAGACG
CTGGACAAGTACCGACAGGAGAGCACTGTTTCCGGCTTCTTCAGCGACGTTTCCGCCAAC
AAGGTCGACCCCATGGCGCTCATCGACCCCACTTCTGAGTCGCAGTTTGAGCAGGTCATC
ACCGGCAAGAACGGTAAGAAGGCTCTGTTTGTGCCCACCGAGGAGCAGGTGGCCGAGGCT
GAGGCTCTCAAGACTGCGCCCATCCCCAACAAGGTCGACGGCGAGTTCGAGGCCCATCTG
ATCAATATGATCATGAAGCATGGCCGAAAGAACGCTGCCCGACGGCACTTTTACCAGGCT
ATGGAGCTCGCTCAGGTCATGATCAAGGCCGACCCCATTCCTCTGCTCAAGCAGGTCTTT
GATGACGTTGCCCCCGTCTGTGTCATCAAGTCGACCCCCGTTGGTGCTCGAAAGGTCCAG
TACCCCGTTCCCATCACCGAGCGACAGCGACGACGAATAGTGTGGAAGTGGTCCGTCGAC
AACGCCGAGAAGCGGCCCAACCGATCATTCTCGGTCCGACTCGGAGAGGAGATAGCATCC
GTCATTAAGTCCAAGGGAGCGTCGCTCATGGAGAAGACCCTGGTCATCCACAACCTCGCC
GTGGCCAACCGAGTCCATGCTGACCCCAGCCGACCCCGAAAGTAGAGTATTGTATATAGT
TAAGGAGAGAACAGATCCCGATATCGAGGAGCTTACTCCGAGAGAATGGGCGTAAGAATG
AAACACGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08470g_CDS-001

Protein length: 335 aa.
Product: Conserved hypothetical protein

>YALI0D08470g_CDS-001 MLRTTSGLARFSARRGYASASPAKILVGLNVRADRFDGDQKALAQELAVNSDLGEEDTDA
IAAKYTERIKANAVKPIAPETAEGHARQWIALLDDIKAKSMSTEKFEGKDALDMQKFRET
LDKYRQESTVSGFFSDVSANKVDPMALIDPTSESQFEQVITGKNGKKALFVPTEEQVAEA
EALKTAPIPNKVDGEFEAHLINMIMKHGRKNAARRHFYQAMELAQVMIKADPIPLLKQVF
DDVAPVCVIKSTPVGARKVQYPVPITERQRRRIVWKWSVDNAEKRPNRSFSVRLGEEIAS
VIKSKGASLMEKTLVIHNLAVANRVHADPSRPRK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG