YALI0D08492g

Overview

Description similar to uniprot|P32844 Saccharomyces cerevisiae YIL068c Exocyst complex component SEC6
Locus type CDS
Locus tag YALI0D08492g

Location

Species Yarrowia lipolytica Positions 1088402..1090868
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2467 (nuc.)
Previous locus YALI0D08470g Next locus YALI0D08503r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08492g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08492gYALI0D08492g_mRNA-001YALI0D08492g_CDS-001

Nucleotide sequence

 

>YALI0D08492g
ATGGAGAGCGCCGTCGCCCGGGTGGCCGAGCTGCTCAAGCGGTCCGACGACCTGGACAAG
GTCGAGCTCATCACCCAGCGTCTGCAGCGAGAAAAGGCCGCCATAGATGTGCAGCTCAAG
GCCGAGGTCAAGTCGCACATTGACTCGACTGGCGGCGCTGTTATCAAGCTGGCGGATTCT
AAGCGAATCATGGCCGAAATCAAGGGCGAGCTCATGAAGATCGACCGACTGTGTTCCGAG
TCGCAGCTGTCCGTGAGGGACTTTGAGAAAATCAACCGACTTGCCAACATTCACAGAAAC
TTCATCAAGACCCAGGAGTTTGCCGACAACATGAAATCGCTTCATGGTCGTATCCAGCAG
GTCAATGACATGATCGAAGACGATTGTGGAGACGGCCAGGGAGGCATCGAGGCCCAGCTG
GACTCGCGAGTACCCAACCTGCTCACGATCCACTACATGCTCTCCGAAATGCGCGACTTC
CGTGATTCCGCCATGTTTCACGCGGAAAAAGCCAGTGAAGATACTCGAAGAACCACCATC
AAGCACTTCGCTCCCCTGGATCCTCTGATTGCCAAGTTCGACCGGGTCGTGGAAGATGTG
GGAGGCAACCTGCTGGAGTTCATCCGAAGCGGCAACACATCACTGGTCGTACGACTCGCG
AAAATCATCGATCTCGAAGAACGAGAAGATCTCAAGGCCACTGTTCTTCTGGAAGTGAAT
GGAAAGGCCAAACAGCAAAACGGAGGTACAGGAGGAGGATTCCGATCTCCCCACATGAAT
GGAAACAGCAACAACAAAAACAACAGCATGAGCGTGACTCTGGGTAACAATGTCGCTCCT
CGATCCCCCAGGGGTTATCCTACCTTGTTCCTTCGAGCCATGGAAAAGTCCATCAAGGAC
TCGTTTGAAGCATGCATTGAGTCTTTCCCCGGGGACTGCATCACGCTGCTCGAGAACCTG
GCATGGATTTATACCGATTTGGAGCTCACCCGAATGGAATTGGCTACTCTGGTGCCCAAA
CGATGGCAGATTTTCGACACGGTGCTCAAGTTCTACCATGTGGAGACCCACAATCTGCTG
GATCAGGTGCTGGCTACAGATCCCGACGCACAGTCCATTCTGGCTATTCTCAACTACGTC
AAAGACTACTACGACACGATGAAAAAGGGCTTTTCCGTGTCTAAGGAGCAGCTTCAGCCC
CCTCTTCTGGACGGCAAGGAGAACGATCTGTATGACGACTACATGAAGCTCATTGTCAAC
AAGCTCAACGAGTGGATGGAGAACTTGGCCACCACTGAGCGCCAGGCCTTCATCAACCGA
GACAATGCTCCTGAAATGGACAACGACGGACGATATGCTCTGCAGGGTGAGGTGATCACG
TTCAAGATGATCACCCAGCAGATTGAGGTTGCTGCCGACTCGCAGCAGGGCAGAATTCTC
GCTGGAGTTGTCGAGGAGTGTGGTAATGTGCTCAAGGAGCGACAAGCATCCTGGGAGGCC
ATTATGACCAAGGAGGTCAAGAAGGAGATTCGAGTGGCCCAGCTGCTGCGAGACAAAAAG
AAGCGAAAGGAGGCCGAAAAGGCCCTGGCCAATGGACAAGACATTGATTCAGACGACGAG
CTGCAAAACAATGCCGGTCTGGTTGATTACATGATCGCTCTTGCCAACGACCAGATCCGA
GGAGCCGATTACACCGAGGCTCTGAGCTCCAAGGTGGCTCCTGTGGTGTCTCAGAAGTAC
TCTACCCAAATTACCAGCACCCTGGAGACCGTTTCCGATGGCTACGTTGCGTTTGCTAAG
CTATGTACCAACTCGCTCATCGAGATCATCTTTTCAGATCTCAAACCTGCATTCGACATT
CTGTTCGAGACCTCGACCATTGGTGCTTCGGCCTGGTACAAGGGCATCCCCATGTCTCAG
ATCACAGATACTCTGGCTGAGTACTACGGCGATGTCCAGTCTCACATGAACCCTCTTTTG
ATTGAGGTGTTCCTTGACGATCTTCTGGACGAGACTGTTCTTCATTATCTGCAGTCTCTG
CGGTCCGGCAAGCACCACAAGGTGTCTCTCAAGCTGCCCAAGGCGTCGGTTCAGATCAAG
CAGGACATTGGAAAGATGTACGATTTCTTCGACGAACACCATTCGTCCCGAGAACACGTG
CAGCAGGTATTCAAGGTGTTTGAACATCTGCTGTGGATTCTGGAGTCGCCTATTGAGGAG
CTTGGAGATAAATACACACAGCTGAAGGCTGAATTCTGGGACTGTCCTCTGTCCTTCTTT
GAGGCCGTGGTTAATGCCCGAAAGGATATCGACAGCAAGATGGCCAAGGAGCTCATCAGT
GTTGTTCGTAGCGAAGCTCTTTTGGGAGGAGGACCAGAGGAGGAACTACAGCCTACTATT
ATGGGTAGATATGGACGAAGTTGATATGATGATGTATAACAATGAATTATTTATGACACG
GGAAAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08492g_CDS-001

Protein length: 808 aa.
Product: Essential 88kDa subunit of the exocyst complex, putative

>YALI0D08492g_CDS-001 MESAVARVAELLKRSDDLDKVELITQRLQREKAAIDVQLKAEVKSHIDSTGGAVIKLADS
KRIMAEIKGELMKIDRLCSESQLSVRDFEKINRLANIHRNFIKTQEFADNMKSLHGRIQQ
VNDMIEDDCGDGQGGIEAQLDSRVPNLLTIHYMLSEMRDFRDSAMFHAEKASEDTRRTTI
KHFAPLDPLIAKFDRVVEDVGGNLLEFIRSGNTSLVVRLAKIIDLEEREDLKATVLLEVN
GKAKQQNGGTGGGFRSPHMNGNSNNKNNSMSVTLGNNVAPRSPRGYPTLFLRAMEKSIKD
SFEACIESFPGDCITLLENLAWIYTDLELTRMELATLVPKRWQIFDTVLKFYHVETHNLL
DQVLATDPDAQSILAILNYVKDYYDTMKKGFSVSKEQLQPPLLDGKENDLYDDYMKLIVN
KLNEWMENLATTERQAFINRDNAPEMDNDGRYALQGEVITFKMITQQIEVAADSQQGRIL
AGVVEECGNVLKERQASWEAIMTKEVKKEIRVAQLLRDKKKRKEAEKALANGQDIDSDDE
LQNNAGLVDYMIALANDQIRGADYTEALSSKVAPVVSQKYSTQITSTLETVSDGYVAFAK
LCTNSLIEIIFSDLKPAFDILFETSTIGASAWYKGIPMSQITDTLAEYYGDVQSHMNPLL
IEVFLDDLLDETVLHYLQSLRSGKHHKVSLKLPKASVQIKQDIGKMYDFFDEHHSSREHV
QQVFKVFEHLLWILESPIEELGDKYTQLKAEFWDCPLSFFEAVVNARKDIDSKMAKELIS
VVRSEALLGGGPEEELQPTIMGRYGRS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG