YALI0D08448g

Overview

Description weakly similar to uniprot|Q03976 Saccharomyces cerevisiae YDR175c RSM24 component of the mitochondrial ribosomal small subunit
Locus type CDS
Locus tag YALI0D08448g

Location

Species Yarrowia lipolytica Positions 1084412..1085621
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1210 (nuc.)
Previous locus YALI0D08419g Next locus YALI0D08470g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08448g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08448gYALI0D08448g_mRNA-001YALI0D08448g_CDS-001

Nucleotide sequence

 

>YALI0D08448g
ATGCTCAGACTGGCAAACCAAAGCAGGGTGCTCCAGGGAGCGTTTGCACGAGCCACGGTT
GTAGGCCGGGCCTCCGCCGTGACCCATGTTCGTTTCATGTCCGATTCGACCGACGTTCCT
CCCTCGGATCAGTCCAAGCCCTCGTTCCGAACCGACAAGCGCATTGAGTCAGCCACTCCG
TTTGCTGAGCCCTCCGAGATCCCCTCTGCAGACGCCTCTCTGCTTCCCCGGACCAACCGA
GTCGAGGAGCTCCAGTTTGAGGCCAAGTACACGCTCGACGCCAAGACGAAGGAGGCTCTG
GATACCATTGAGGAGCTGGGCTTCAAGACCCGGCAGAACCTGGATCCCGAGCGATTCAGC
GACGAGGAACTAGACCCCAGAAACTGGACCGGCCTCGAGTTCCATGAGGTGGTCACGCGT
CTTCACAACCGACAGTTCAAGCTCGGATCGGCCTACTCCCAGAGCGAGGAGGAACTGCGA
CAGCTGGTTCGAGCTGGTCGAGTTGCTGGAGCCGACGCTGGCGTAATCCGATCCGCCTAC
CACGGCAAGCATAGCGTCGTTGAGAAGAATGAGGAGGACGACGATCTTTTGGATGCTGAT
CACGTTAACGAGTTCATGTACGACGATATCCCCACTGCTGGACACATGCAGGTGGAGAAG
GTGCGAAAGATGCGACACCTCCAGCGAATGTCTGCCTACGTGCTCCCCCGACTCGTCGAT
TATCATGTGCCCTTTGATGTCAAGGAGGCTGACAAGAAGGCTTCTCCCCTGACCTTCAAG
TACACCTCGTACACCGGAGAGGAGGCCGACGAAGAGGCCAAGGTGGTCTGCTACTTTGAC
CCTGCCAACCTGGGTCTCTCCGACAAGGGCCTGCACAAGTTCAAGCTGCTGTCTGGACAG
AACTACGACGCTCTGACCGGCCAGTGCAAGTTTGCCAGCAAGCGACACCCCTCTGCCCCC
GAAAACAAGCACTACCTGCTGACTCAGATTCTCAAGCTCAAGACCGAGGCCGAGCAAGGT
GACTCGTTCGAGGACGTGCCTCTGGACACCCGACACGCCCGAAACAAGGCGGAGCGCATC
GCCAAGCGAGACCGATACCGACTGGCCAAGTTCCCCGAGGAGTGGAACCGACCTGAAGAC
AAGGCTAAGCAGACCGCTTTCAAGGCTCTTTTCGGGTAATGTATATAGTAAATGAGTAAC
AAGCAAACGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08448g_CDS-001

Protein length: 393 aa.
Product: Conserved hypothetical protein

>YALI0D08448g_CDS-001 MLRLANQSRVLQGAFARATVVGRASAVTHVRFMSDSTDVPPSDQSKPSFRTDKRIESATP
FAEPSEIPSADASLLPRTNRVEELQFEAKYTLDAKTKEALDTIEELGFKTRQNLDPERFS
DEELDPRNWTGLEFHEVVTRLHNRQFKLGSAYSQSEEELRQLVRAGRVAGADAGVIRSAY
HGKHSVVEKNEEDDDLLDADHVNEFMYDDIPTAGHMQVEKVRKMRHLQRMSAYVLPRLVD
YHVPFDVKEADKKASPLTFKYTSYTGEEADEEAKVVCYFDPANLGLSDKGLHKFKLLSGQ
NYDALTGQCKFASKRHPSAPENKHYLLTQILKLKTEAEQGDSFEDVPLDTRHARNKAERI
AKRDRYRLAKFPEEWNRPEDKAKQTAFKALFG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG