YALI0D08272g - ACT1

Overview

Description uniprot|Q9UVF3 Yarrowia lipolytica YALI0D08272g ACT1 Actin
Locus type CDS
Gene name ACT1
Locus tag YALI0D08272g

Location

Species Yarrowia lipolytica Positions 1059774..1061439
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1666 (nuc.)
Previous locus YALI0D08250g Next locus YALI0D08294g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08272g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08272gYALI0D08272g_mRNA-001YALI0D08272g_CDS-001

Nucleotide sequence

 

>YALI0D08272g
ATGGAAGGTGAGTACTACCAATGCCATCGATGGCACAGCGGGCTTTGCCATCATCGATTG
TCTGGATTGATGGCGAGTCGGTCCCTGGATTGGACACAAAACCACAAATGGCGCTTTCTC
CCCAGCGACAAGTCATCACCACCAACATGGCGACCAAAGCCACGGGCCAGCAAGCGAATC
AATCCATCATCGAACGGATGGAGCTGCGAGAGCGCTTGCGAGCCCAGAGCGTCCGTCTTG
CCGTTGGGCACCTTCGCGCTTTGCGATGACGTGTCACCACACTGATAATGTCGCATGCTG
CCGCGCATGACCCAACCAGCCCCCGGAAAAGCGCAATCCATCAGCAATCAATCAATCCAT
CAAATAACCACACCATACTAACCTAGACGAAACTGTTGCCCTCGTTATCGATAACGGATC
CGGTATGTGCAAGGCCGGTTTCGCCGGTGATGACGCTCCCCGAGCTGTTTTCCCCTCCAT
CGTCGGTCGACCCCGACATCAGGGTGTCATGGTCGGCATGGGCCAGAAGGACTCCTATGT
TGGTGATGAGGCCCAGTCCAAGCGAGGTATCCTGACCCTCCGATACCCCATCGAGCACGG
TATTGTTACCAACTGGGATGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCT
CCGAGTTGCTCCTGAGGAGCACCCCGTCCTGCTCACCGAGGCCCCCATCAACCCCAAGTC
CAACCGAGAGAAGATGACCCAGATCTTCTTCGAGACTTTCAACGCTCCCGCTTTCTACGT
CTCTATCCAGGCCGTCCTCTCCCTGTACGCCTCTGGTCGAGTCACCGGTATCGTTCTTGA
CTCTGGTGATGGTGTCACCCACGTTGTGCCCATCTACTCTGGTTTCTCTCTCCCCCACGC
CATCATGCGACTCGATATGGCTGGCCGAGATCTTACCGACTACCTCATGAAGATTCTCTC
CGAGCGAGGTTACTCTTTCACCAACTCCGCCGAGCGAGAAATCGTCCGAGACATCAAGGA
GAAGCTCTGTTACGTTGCTCTCGACTTTGAGCAGGAGCTCCAGACTGCCTCCCAGTCCTC
TTCTCTCGAGAAGTCCTACGAGCTTCCCGATGGCCGAGTCATCACCATCGGTAACGAGCG
ATTCCGAGCTCCCGAGGCCCTCTTCCACCCCTCCATGCTGGGTCTTGAGGCTGCTGGTAT
CCACGAGACTACTTTCAACTCTATCATGAAGTGTGATGTTGATGTCCGAAAGGATCTCTA
CGGAAACATTGTCATGTCCGGAGGTACCACCATGTACCCCGGTATTGCCGAGCGAATGCA
CAAGGAGATCTCCGCTCTTGCCCCCACCTCCATCAAGGTCAAGATCACCGCTCCCCTCGA
GCGAAAGTACTCCGTCTGGATTGGTGGTTCCATTCTTGCTTCTCTTGGTACTTTCCAGCA
GATGTGGATCTCCAAGCAGGAGTACGACGAGGCCGGACCCACCATTGTCCACCGAAAGTG
TTACTAAGTGTGGTGATTGCTGTTGTGCAAGCCTTTGCTCGTTTTCTGCTGTATGTAATT
TAAAGAACGATTGTATGAATCGAAGTCAAGGTGAGTGTAGTTTGAGAAGTGTAACCCCAG
TGTCATAGCTGTGTACTCCATTCATTGAAGGGTGTAGTCGTGTTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08272g_CDS-001

Protein length: 376 aa.
Product: Actin
Gene: ACT1

>YALI0D08272g_CDS-001 MEDETVALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPINPKSNREKMT
QIFFETFNAPAFYVSIQAVLSLYASGRVTGIVLDSGDGVTHVVPIYSGFSLPHAIMRLDM
AGRDLTDYLMKILSERGYSFTNSAEREIVRDIKEKLCYVALDFEQELQTASQSSSLEKSY
ELPDGRVITIGNERFRAPEALFHPSMLGLEAAGIHETTFNSIMKCDVDVRKDLYGNIVMS
GGTTMYPGIAERMHKEISALAPTSIKVKITAPLERKYSVWIGGSILASLGTFQQMWISKQ
EYDEAGPTIVHRKCY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG