YALI0D08250g - URC1

Overview

Description uniprot|Q6C9U7 Yarrowia lipolytica YALI0D08250g URC1 GTP cyclohydrolase involved in uracile catabolism, putative
Locus type CDS
Gene name URC1
Locus tag YALI0D08250g

Location

Species Yarrowia lipolytica Positions 1056275..1057796
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1522 (nuc.)
Previous locus YALI0D08228g Next locus YALI0D08272g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08250g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08250gYALI0D08250g_mRNA-001YALI0D08250g_CDS-001

Nucleotide sequence

 

>YALI0D08250g
ATGTCAGTACAGTCAGTAATGGACGTCCTCAGGGACATTCAGGCCAACCCCACAGACGCA
AAGGCCATGGAGCAGCTCGTCAAACAGGTGTCTGCTCTCGAGGCGGCCTCAAAGACCCCT
GCCCAGACTACAAAGACCCTCACCCCACCCATGTTGCCAGCAGACGACGAGGACACAGAA
ATGGAGACAGACAAGCCCTTTGTCACGCCTCTGTCGCCCCCCAAATACGAGGGACGAGTC
ATTCTCACCACCTACCCCGGACAGAGTGGCGTCAAGCCCATTCCTCTAAGATGGGGCGCA
GAGGACCCCAAGGTGCGAGGTCCCATTGTTGTGGCCCGTGATCAATCGTCGTTCAAGCAG
CGAAATGCCATCGGAGCCCACCACGGATCGTATGGTATCTACCACGCACTGGCTGTTGCC
ACCAACGACCTGCCCGTTACACACAGAGCAGACTATACCAACGCCTATCCTCTGCACACC
TTTGGACCCCACCCCCAATGGTCCGACCCCAAGAAGATTGTGGCTATGGACCCTTATGGT
CATCTAGCTCCCTGGCTCTTTCATGAGACGATCGCGGAAGGAGTTGTAGTCAAGCCCACC
ATCGCTGTTACTCGTGCGCAGATGCAACTAGCCGAAATCAGAGACGAGGTCAGAGACGGA
ACCATGGAGGTTGATGGCGAAATTGTGCTCAATAAGAGCGGAGATCTCGCGGTCACCAAG
GTGGCCGTGGAGCCCGTGTGGTATCTGCCCGGAGTCGCCGAGCGATTCGGAATCACGGAG
GGGGAGCTTCGACGTGCCCTGTTCGAGGACACTGGAGGAATGTACCCCGAGCTGGTTACC
CGACCAGACATCAAGGTCTTCCTACCTCCCATCGGAGGCCTGACGGTGTACATTTTCGGC
GACCCAGACCGAGTTTCGGACCCCTCCAAGAAGTTGGCTCTCCGAGTCCATGATGAGTGT
AACGGATCCGACGTGTTTGGCTCCGATATCTGCACTTGCCGACCCTACTTGACCTTTGGT
ATTTCCGAAGCAGTCAAGGAGGCCCAGAAGGGTGGCTCGGGAGTGGTCATCTACTTCCGA
AAGGAGGGACGAGCTCTGGGCGAGGTGACGAAGTACCTAGTGTATAATGCGCGAAAGCGA
GGAGGCGACTCAGCTGCCACGTACTTTAAGCGAACGGAGAACATTGCCGGAGTTAAGGAT
ATGCGATTCCAGGCACTGATGCCCGACATTTTGCATTTCCTGGGTATCCAGAAGATTGAC
CGAATGCTGTCCATGTCCAACATGAAGCACGACGCCATTGTGGAGCAGGGTATCCCCATC
CACGAGCGTGTGCCCATTCCCGACGAGATGATTCCTCCGGACTCTCGAGTCGAGATCGAT
GCCAAGATTGCGGCTGGCTATTTCACCACCGGCGCCGTCATGTCTGAGGAGGAGCTCAGT
GGCGTCAAGGGTCGAACCTGGGACGATGTTGTGCATTAAGGGGTTAGATAGTAGCATGTA
TAACAGATATAATTATAGCAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08250g_CDS-001

Protein length: 493 aa.
Product: GTP cyclohydrolase involved in uracile catabolism, putative
Gene: URC1

>YALI0D08250g_CDS-001 MSVQSVMDVLRDIQANPTDAKAMEQLVKQVSALEAASKTPAQTTKTLTPPMLPADDEDTE
METDKPFVTPLSPPKYEGRVILTTYPGQSGVKPIPLRWGAEDPKVRGPIVVARDQSSFKQ
RNAIGAHHGSYGIYHALAVATNDLPVTHRADYTNAYPLHTFGPHPQWSDPKKIVAMDPYG
HLAPWLFHETIAEGVVVKPTIAVTRAQMQLAEIRDEVRDGTMEVDGEIVLNKSGDLAVTK
VAVEPVWYLPGVAERFGITEGELRRALFEDTGGMYPELVTRPDIKVFLPPIGGLTVYIFG
DPDRVSDPSKKLALRVHDECNGSDVFGSDICTCRPYLTFGISEAVKEAQKGGSGVVIYFR
KEGRALGEVTKYLVYNARKRGGDSAATYFKRTENIAGVKDMRFQALMPDILHFLGIQKID
RMLSMSNMKHDAIVEQGIPIHERVPIPDEMIPPDSRVEIDAKIAAGYFTTGAVMSEEELS
GVKGRTWDDVVH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG