YALI0D06303g - IDH2

Overview

Description uniprot|Q6CA33 Yarrowia lipolytica YALI0D06303g IDH2 Isocitrate dehydrogenase (NAD+) subunit 2 mitochondrial, putative
Locus type CDS
Gene name IDH2
Locus tag YALI0D06303g

Location

Species Yarrowia lipolytica Positions 807958..809826
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1869 (nuc.)
Previous locus YALI0D06281g Next locus YALI0D06325g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06303g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06303gYALI0D06303g_mRNA-001YALI0D06303g_CDS-001

Nucleotide sequence

 

>YALI0D06303g
ATGCTCAACCTTAGAACCGCCCTTCGAGCTGTGCGACCCGTCACTCTGGTGAGTATCTCG
GAGCCCGGGACGGCTACCAACACACAAGCAAGATGCAACAGAAACCGGACTTTTTAAATG
CGGATTGCGGAAAATTTGCATGGCGGCAACGACTCGGAGAAGGAGCGGGACAATTGCAAT
GGCAGGATGCCATTGACGAACTGAGGGTGATGAGAGACCGGGCCTCCGATGACGTGGTGG
TGACGACAGCCCGGCTGGTGTTGCCGGGACTGTCTCTGAAAAGCAATTTCTCTATCTCCG
GTCTCAACAGACTCCCCTTCTCTAGCTCAATTGGCATTGTCTTCAGAAGGTGTCTTAGTG
GTATCCCCATTGTTATCTTCTTTTCCCCAATGTCAATGTCAATGTCAATGGCTCCGACCT
CTTTCACATTAACACGGCGCAAACACAGATACCACGGAACCGACTCAAACAAATCCAAAG
AGACGCAGCGGAATAATTGGCATCAACGAACGATTTGGGATACTCTGGCGAGAATGCCGA
AATATTTCGCTTGTCTTGTTGTTTCTCTTGAGTGAGTTGTTTGTGAAGTCGTTTGGAAGA
AGGTTCCCAATGTCACAAACCATACCAACTCGTTACAGCCAGCTTGTAATCCCCCACCTC
TTCAATACATACTAACGCAGACCCGATCCTACGCCACTTCCGTGGCCTCTTTCACCGGCC
AGAAGAACTCCAACGGCAAGTACACTGTGTCTCTGATTGAGGGAGACGGTATCGGAACCG
AGATCTCCAAGGCTGTCAAGGACATCTACCATGCCGCCAAGGTCCCCATCGACTGGGAGG
TTGTCGACGTCACCCCCACTCTGGTCAACGGCAAGACCACCATCCCCGACAGCGCCATTG
AGTCCATCAACCGAAACAAGGTTGCCCTCAAGGGTCCCCTCGCCACCCCCATCGGTAAGG
GCCACGTTTCCATGAACCTGACTCTGCGACGAACCTTCAACCTGTTCGCCAACGTCCGAC
CTTGCAAGTCCGTCGTGGGCTACAAGACCCCTTACGAGAACGTCGACACCCTGCTCATCC
GAGAGAACACTGAGGGTGAGTACTCCGGTATCGAGCACACCGTCGTCCCCGGTGTCGTTC
AGTCCATCAAGCTGATCACCCGAGAGGCTTCCGAGCGAGTCATCCGGTACGCTTACGAGT
ACGCCCTGTCCCGAGGCATGAAGAAGGTCCTTGTTGTCCACAAGGCCTCTATTATGAAGG
TCTCCGATGGTCTTTTCCTTGAGGTTGCTCGAGAGCTCGCCAAGGAGTACCCCTCCATTG
ACCTTTCCGTCGAGCTGATCGACAACACCTGTCTGCGAATGGTCCAGGACCCCGCTCTCT
ACCGAGATGTCGTCATGGTCATGCCCAACCTTTACGGTGACATTCTGTCCGATCTTGCCT
CCGGTCTTATCGGTGGTCTTGGTCTGACCCCCTCCGGTAACATGGGTGACGAGGTCTCCA
TCTTCGAGGCCGTCCACGGATCCGCTCCCGACATTGCTGGCAAGGGTCTTGCTAACCCCA
CTGCTCTGCTGCTCTCCTCCGTGATGATGCTGCGACACATGGGTCTCAACGACAACGCCA
CCAACATCGAGCAGGCCGTCTTTGGCACCATTGCTTCCGGCCCCGAGAACCGAACCAAGG
ATCTTAAGGGTACCGCCACCACTTCTCACTTTGCTGAGCAGATTATCAAGCGACTCAAGT
AGACGATATAACGATAATGATAATGATTTGATGTAATGTTGGAAGCGATATGTGTGATCA
TCAGAGCGAGAGAGTTGTTTTGTGGTGGAGAGAAATCAAGTAGTGATGATGAAGAAGGAT
TTACAAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06303g_CDS-001

Protein length: 370 aa.
Product: Isocitrate dehydrogenase (NAD+) subunit 2 mitochondrial, putative
Gene: IDH2

>YALI0D06303g_CDS-001 MLNLRTALRAVRPVTLTRSYATSVASFTGQKNSNGKYTVSLIEGDGIGTEISKAVKDIYH
AAKVPIDWEVVDVTPTLVNGKTTIPDSAIESINRNKVALKGPLATPIGKGHVSMNLTLRR
TFNLFANVRPCKSVVGYKTPYENVDTLLIRENTEGEYSGIEHTVVPGVVQSIKLITREAS
ERVIRYAYEYALSRGMKKVLVVHKASIMKVSDGLFLEVARELAKEYPSIDLSVELIDNTC
LRMVQDPALYRDVVMVMPNLYGDILSDLASGLIGGLGLTPSGNMGDEVSIFEAVHGSAPD
IAGKGLANPTALLLSSVMMLRHMGLNDNATNIEQAVFGTIASGPENRTKDLKGTATTSHF
AEQIIKRLK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG