YALI0D06281g

Overview

Description highly similar to uniprot|B9W8I3 Candida dubliniensis putative dolichol-phosphate mannose synthase
Locus type CDS
Locus tag YALI0D06281g

Location

Species Yarrowia lipolytica Positions 804749..806502
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1754 (nuc.)
Previous locus YALI0D06259g Next locus YALI0D06303g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06281g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06281gYALI0D06281g_mRNA-001YALI0D06281g_CDS-001

Nucleotide sequence

 

>YALI0D06281g
ATGTCCGAGAACAAGTATTCCGTCATTTTGCCCACTTATAATGAGCGGGAGGTGAGTACC
GAGACCCAAAGCAGGACGAAACAGCGAGACAATACCGACGAAGCAAGACAGCACGAACCA
AGCGAGTTGAGGTGACGAATTGGAATGACTATTCGATTTGGAGTGTTATTTGAAAGTAAA
GAGGGCTTGATCTGGAGGGAGAGATAACGGCTCAGGGAATTGGAGTGAACGAAAAAGAAT
CACAAACGGGTGATACGGTGTTGAATTTGTTGGTGTGTGATGGTGTTTAGTGGTGAGAAG
ACTGACTGCTGTTGTGCCAGATATGAGATGAAGCCATGATCTGGATTCGATGGTGTCTCG
ACCTACATTTGATGGAGCCATGCTGTAACACATACCAGATTTGACATTGGTGACAGACTC
GTTGGGGAATCTGTACTCTTTGGCGTTGACTACATCAATTGGAATGATTCTGCTCGGCTG
TCGCGATATACATACCCTGTCATGACCTACTCTTGATCTGATCTTCAGGCATGACCAACC
TCACACCAATGCCGGAGCCCACCACAGCTGATACTGCTGTCTGTTGTCTACTGATTGAGC
TTCCAAAGCGGTTGTCAAATAGACCAGCGTCTTCTACCTTCCCTTCAGGTTTCCACCCAA
GAGCGAGACATGTCCCGATTAACCTGTTAATCACAACTTCAGTTAATTGTCTCATTTCAA
ATCGTCATTCTTCCCACGTCTGTCATTCTAGTATCTCCCGAAGTGGCTTATCCTCCTAGT
TTCAGACATCATTTCACGTGTTCGAAGAACTGGACGCCACGAACCGATGTTTCAACCATG
CCGTTCAGTCCGTAGCAACTGAAAATGTCGTCCCACAATTACACACTCGTTCAACGTCTG
TCAGGCTGCACTCTCTACCCTTACTAATCTAGAACCTCCCCATCATGGTCTGGCTCCTGC
ACAAGACCTTCACCGAGAACAACCTCGACTGGGAAGTGATTATTGTCGATGACGGCTCCC
CCGACGGTACCCAGGAGGTGGCCAAAGAGCTCATTGCTGCCTACGGAGACAACGTCGTGC
TCAAGCCCAGAGCCGGCAAGCTCGGTCTGGGAACTGCCTACGTCCACGGTCTGCAGTTCG
CCAGAGGCAACTTTGTCATCATTATGGACGCCGACTTCTCCCACCACCCCGAGTCCATTC
CGGAGTTCATTGCTCTGCAGAAGAAGAACAACCACGACATTGTCACCGGCACCCGATACG
CCGGCAACGGAGGAGTCTATGGCTGGGATCTCAAGCGAAAGCTTGTGTCTCGAGGCGCCA
ACTTCCTGGCCACCCTGGTCCTGCGACCCCACATTTCTGACGTGACCGGCTCTTTCAGAC
TCTACAAGAAGCCCGTGCTCGACAAGGTCATCCACTCCACCAAGTCTAAGGGCTACGTGT
TCCAGATGGAGATGATTGTGCGAGCTCGAGCCATGGGCTACTCCATTGGCGAGGTGCCCA
TCTCTTTCGTCGACCGACTCTACGGAGACTCCAAGCTTGGAGGCGACGAGATTGTCCAGT
ACGCCAAGGGTGTGTGGAACCTTTTCGTTGACATTTAAGCCGAAGCAACAACAGTTAGAA
CAATCAATTATAATGAGAATCTTGGGTAGGTTGGAGATATCTACAGTATCATACAGTAGG
AGTTGGTTGGGTTGGTTGGATCAGTTCACGCTTTAGTGGACTAGACATAACTTAGTTGAA
GACCTTAGTTGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06281g_CDS-001

Protein length: 239 aa.
Product: Dolichol-phosphate mannose synthase, putative

>YALI0D06281g_CDS-001 MSENKYSVILPTYNERENLPIMVWLLHKTFTENNLDWEVIIVDDGSPDGTQEVAKELIAA
YGDNVVLKPRAGKLGLGTAYVHGLQFARGNFVIIMDADFSHHPESIPEFIALQKKNNHDI
VTGTRYAGNGGVYGWDLKRKLVSRGANFLATLVLRPHISDVTGSFRLYKKPVLDKVIHST
KSKGYVFQMEMIVRARAMGYSIGEVPISFVDRLYGDSKLGGDEIVQYAKGVWNLFVDI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG