YALI0D06325g

Overview

Description similar to uniprot|P52893 Saccharomyces cerevisiae YLR089C ALT1 (ohnolog of YDR111C) Putative alanine transaminase (glutamic pyruvic transaminase)
Locus type CDS
Locus tag YALI0D06325g

Location

Species Yarrowia lipolytica Positions 812280..813980
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1701 (nuc.)
Previous locus YALI0D06303g Next locus YALI0D06347g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06325g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06325gYALI0D06325g_mRNA-001YALI0D06325g_CDS-001

Nucleotide sequence

 

>YALI0D06325g
ATGCTGAGACAGGGTATAAAGCGTGCGGTGGTGCATGCCCGAGCCGTACAGGCCGTGTGC
AAACGAACCAACATGACCATCACCAAAAAAGATCTCAACCCCCAGGTGGTCAACGCCCAG
TATGCCGTGCGAGGCAAGTTGGCGGTGCGGGCCGACGAAATCAAGGAGCAGATGCGAACC
AACCCGTCGCTGTTCCCCTTTGACAAGGTCATCAACGCCAACATTGGCAACCCCCAGCAG
CTCGACCAGAAGCCCGTCACTTTCTACCGCCAGGTCCTGGCTATGCTGCAGTACCCCGAG
TTGATGGATCGGGCCGCCGACGTGGGCATCCCCAACGACGCAGTGCAGCGTGCTCGAAAG
CTGCTGGACGACATTGGATCGGTCGGCGCCTACTCGTCGTCCCAGGGCGTCACCACCGTG
CGAAATTCGGTGGCTAACTTCATCCAAAAGCGAGACGGCTACGCAGCCTCGGCCTCCGAC
ATCTACCTCACCACAGGAGCCTCCAACGCCGTCACTTTTCTGCTCACAACTTTGGCTCGA
GGCGACGGATCGGACGGATTCATGATCCCCATTCCCCAGTATCCCCTTTACACCGCCACC
CTGACCCTGCAGAACTCCAACCCCGTCCCCTACTACCTGGACGAAGCCAAGGAGTGGGGC
ACCAACATGGCTGCTCTCAACGACGCCGTCGAGTCCTCCAAGCACAAGCTCAAGGCCGTC
GTGGTCATCAACCCCGGAAACCCCACCGGAGCTTGTCTCGGCGTCAAGGAAATCAAGGAC
ATTCTGCTGCTGGCACAGAAGGAGGGCATTGCCGTGATCGCCGACGAGGTCTACCAGGCC
AACATTTTTGCCTCTGGCCAGTTCCACTCCTTCAAAAAGGTCTGGTCCATTCTCAAGGAG
GAGAACCCCGACTTCAACGTGCCCCTGGCATCTCTGCATTCCACCTCCAAGGGCAAGATC
GGAGAGTGTGGCCAGCGAGGAGGCTACATGGAGCTCGTTGGTTTCCATGAGGACGTGATT
GAGCAGATCTACAAGCTCTGTTCCATCTCTCTGTGTCCCGTTGTCACCGGACAGGCTCTT
ATTGAGTGTATGGTCAACCCCCCCGTTGAGGGAGACGAATCGTACCCTCTGTTCAACAAG
GAAACCAACCACATTATGGATACTCTCACCCAGCGAGCCAACCGGCTGTACGAGGCCTTC
AAGGAGATGCCCAAGGTCTCCTGCGAGCCTCCCCAGGGCGCCATGTACCTGTTCCCCTCC
ATCGAGCTGCCTGCTGGCGCCATTGCCGAGGCCGAGCGACACAACGAGCAGCCCGACGAG
TTTTACTGCATGAAGCTGCTGGAGCAGACTGGTATCTGTGTTATTCCTGGCTCTGGATTT
GGCCAGAAGGATGGCACTTACCATTTCCGAACAACCTTCCTCGCACCTGGTGATGACTAC
GGAGAGAAGATTGTCAACTTCCACAAGAAGTTTTTGGCTCAGTACGAGTAAGTCTTTTCC
GAACCAAGCAAGACCAACAAGACTTGCAGATCAAGCTGTTAATGTAACGTAGATTGTGTG
CGGGGGCCTGAATGGTAGGTAACAGTACGACCATGGACAAGGCTCATTGCACTAACGAGA
AGATGAAACTCATCTTTTAGAAGGAGCCGCAATTGTACTTGTACGAAGACAGAATAAAAT
GTATACATATTGACAAGCAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06325g_CDS-001

Protein length: 497 aa.
Product: Alanine transaminase (glutamic pyruvic transaminase), putative

>YALI0D06325g_CDS-001 MLRQGIKRAVVHARAVQAVCKRTNMTITKKDLNPQVVNAQYAVRGKLAVRADEIKEQMRT
NPSLFPFDKVINANIGNPQQLDQKPVTFYRQVLAMLQYPELMDRAADVGIPNDAVQRARK
LLDDIGSVGAYSSSQGVTTVRNSVANFIQKRDGYAASASDIYLTTGASNAVTFLLTTLAR
GDGSDGFMIPIPQYPLYTATLTLQNSNPVPYYLDEAKEWGTNMAALNDAVESSKHKLKAV
VVINPGNPTGACLGVKEIKDILLLAQKEGIAVIADEVYQANIFASGQFHSFKKVWSILKE
ENPDFNVPLASLHSTSKGKIGECGQRGGYMELVGFHEDVIEQIYKLCSISLCPVVTGQAL
IECMVNPPVEGDESYPLFNKETNHIMDTLTQRANRLYEAFKEMPKVSCEPPQGAMYLFPS
IELPAGAIAEAERHNEQPDEFYCMKLLEQTGICVIPGSGFGQKDGTYHFRTTFLAPGDDY
GEKIVNFHKKFLAQYE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG