YALI0C08415g

Overview

Description similar to uniprot|Q6CCH8 Yarrowia lipolytica YALI0C09240g
Locus type CDS
Locus tag YALI0C08415g

Location

Species Yarrowia lipolytica Positions 1144330..1145373
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1044 (nuc.)
Previous locus YALI0C08393g Next locus YALI0C08437g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C08415g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C08415gYALI0C08415g_mRNA-001YALI0C08415g_CDS-001

Nucleotide sequence

 

>YALI0C08415g
ATGGATAAAGTGATTGAAGCTGTTCAGAAGATTTGTGTCACGGAGACGGTAGAAAAACCA
GAGTCCACAGATTGTGAGTCTACCACCAAGACTGAATTAACCAGGGCTACACTGGACTCA
TCACTTTCCCACACTACATGCGACTCAATCACACCTCCACAAGCGGTAGTTCCTGATCTT
CTTGTCTGTGGCACAAAATCTGGCTCTTCAGCGGAAACCAAGGAAACAGAAGCCATCTCT
CACAATCTTACAGAACCTATTGCTACCGTGGCTATCTCTACACCCTCGCACTCCGACAAT
GACTCTGATTCATCCTTCTCAACACCCTCTCCCTCCCAGCTCTGTCATACTGAGCTTCTT
GAAATTAATTTCAATGTACTTCCTGAGAACGACAGTGATGATAACGATGAAATGAGCCCC
TACATTGAACTCGGAGGCTCGTTCCAAAGAACCCACGATATGTGCATGGACAAAGAGGAG
ATTGTGCTAACTAATGAGGAGATTATCATGGACGAATCCGAACAGAACAAGCCTAAATAC
GTCACTCTTATTTTGGATTATCCTCTGGACGACGACTATGAGTTCAAAATCTATCCTGAC
GATAAACGGGGGTTTACACGAGGCCACCTGATTCGAGAAATCAAGCGTCACTACGACAGA
GTCTATGCTGAAGAGGAGGAGACCAGCACGGTTCCGGTCGGAAATATTCCCGGTATGATG
AACCGGGTCACTACTGACGGAAACTATGGTGTTTGGGGCCACGATCTGAGTGATCTGGCT
TTGCATACGGTCAGTTACAACTCTCAGAAGAATTTGTTTTGGTTAGGCGTCGATAGTTAA
AGAAGAGGGGAGTTGTGATATATAAATGCGAAAGAAACCCAGCAAAACCAGAACTGCGTC
TCTTATTCTAATCTGTACACGTTTCTTACTGGTGACTACACTTCAAAACACGCAGGTCGC
ATTCACGACGTTTGCATTACAACTCTCTATTAATTTTTGGAACAATTTTTTGATTAATAT
AGGGAATCGAATGAATCTTAACTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C08415g_CDS-001

Protein length: 280 aa.
Product: Conserved hypothetical protein

>YALI0C08415g_CDS-001 MDKVIEAVQKICVTETVEKPESTDCESTTKTELTRATLDSSLSHTTCDSITPPQAVVPDL
LVCGTKSGSSAETKETEAISHNLTEPIATVAISTPSHSDNDSDSSFSTPSPSQLCHTELL
EINFNVLPENDSDDNDEMSPYIELGGSFQRTHDMCMDKEEIVLTNEEIIMDESEQNKPKY
VTLILDYPLDDDYEFKIYPDDKRGFTRGHLIREIKRHYDRVYAEEEETSTVPVGNIPGMM
NRVTTDGNYGVWGHDLSDLALHTVSYNSQKNLFWLGVDS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG