YALI0C08393g

Overview

Description similar to uniprot|C5DH17 Lachancea thermotolerans KLTH0E00638p
Locus type CDS
Locus tag YALI0C08393g

Location

Species Yarrowia lipolytica Positions 1142297..1144324
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 2028 (nuc.)
Previous locus YALI0C08371g Next locus YALI0C08415g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C08393g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C08393gYALI0C08393g_mRNA-001YALI0C08393g_CDS-001

Nucleotide sequence

 

>YALI0C08393g
ATGAAGCTCTCACTCATTCTTGCGGCTCTTGCCACGTCCGCTTCGTCCTTGAAGACGGTC
ACTTTCAAGGATGCGACTGGCAACAATGTCTCGTATGTTGAGAAGCCGACTTTTGACCAA
AAGAAGGTCGATGCCTACGTTCTTCAGACCGAACAGATTGTCAATTCCACCCACATGGAC
AAGTGTGGCAAGTGCCTGACCGCCATTGCTCTCGGCAAGCAGGCTGCGTTGAACGGAGAT
GTGCAGCTCATTCCTGCAGTGCTTACCAAGCTGTGCAAAATGTACAAGTTCTCCAAGACA
TGTGACACCGACTATGGAGCCGAAACTACTGGCTACGACACCGATGGAACCCATGCAGCC
CAGACTCTCACTCTCATTGGCGACCCTTACGGCACTGACGGCCAGTATCTCTGCTACTAC
AAGGTGAACCAGGCGTGTCCTCTTCCTGAGTTGCCCAAGTTTGATCTCAAGGCCCTGGGG
TGGTGGGGCGACAAGCCTGACAATGTTACTGTTCCCAAATCCGAAAACAAGACCTTCAAC
GTGGCACATCTTAGTGACCTTCATATTGATCTGCGGTACGAGATGGGTGCCGAGGCCAAC
TGCACAGAAGGAGGAAAGATGTGTTGTACCCCGGATCAGTTCAACAAGGGCGCTCGAGCT
GCGGGTCTACAAGAGGCCGTTGTTCCCGCTCAGAAATACGGCATGTACACTTGTGACGTG
CCTCCTCCTATGATTGACTTGACTCTTCAGACAGTCGGACAGTTTGCCAAGGAGAAGGAG
TTCGAGTTTGCCATTTTCACGGGCGACATGGTTTCCCACGATGTGGCGTCACAAACCAAC
CTGGCCAATACTGCTCTGTCTGAAGAAGCCATTTACCACGCCTTCAAAAAGTACATGGGG
GATGTGCCTGTCTTTATGACCTATGGTAACCACGATACTTTCCCCTACGGCCAACTGGCT
CAGCACAAGAGTGGCTACGGAGGCTACTTTGTGTGGAATGACCAGCTGTCTGCTCAGCTA
TGGAAAGACTATGGCTGGATTGATGCCGAAGCCGAGCAGCAGGCTATTCATACCTATGGA
TCTTTTGCCACCACTACCAAGAGAGGTCTCCGGGTCATTTCTCTGGACTCCAACCTCTGG
TACAAGAAGAACTTTTACAACTTCTGGAACACCTCCACCGACCCTGACCCCTCTGGACTG
TTCCGATTCCTGTCAGATGAGCTGCTGGAGTGCGAGAAGACCGGTCAGCGAGCTTGGCTC
ATGGCACATATTCCTCCTGGCGGAAACATGGACAACTCTTTGGCTCACTCTACTGAAATC
ATCCGCCAGATCGTCAGCCGATTCTCCAACACCATTGCCGGCCTCTTCTTCGGTCACGTG
CACGAGGATCAGTTCAACGTCTGGTACGCAGGAAACGGATCCACCAACACTGTTGACAAC
GCTCTTCAAATTGCCTTCCTTGGGCCCTCCGTCACTCCTCTCACTTACTACAACCCTGCC
TGGAGATACTACGAGGTGGACACCAAGACTTTTGAAGTCATGAACAGTCACACCTACTAC
GCCAAGCTCAACGAAAGCTTTGCTTTCGACTTTGAGCACCCTGTTGAGAAGACTATCGGC
AACTTCTCGTACCTCGGCTATCCTCAGATTACCAACATCTCTTCTGAGGACGTTAACGGA
ACCGCTCCTGTATATCATTACGAGTACAATGCTCGAGAAGCCTATGATCCCGATCACGAG
TGGCCTGCTAATGCTCCCCTTAATGCCACCTTCTGGCATAAGGCTGTCGATTATATCGTC
AACCGAAACGAAACTCGAGACTTGTTCCTCAAGTATGAGTACCGACAATCGCCGTACGTC
CCCAAGTGTGCCGACGATAACTGTCTCGCAAACGTCTATTGCTTCCTGTCTTCAGGAACC
GTCCCCCAGGTGGAGGAGTGCCAGAAGAACCACAAGGGCTTTAAGAAACAGATCTACATC
AAGAGAGATGGTACCTATGGAGATGAGCCGGAGCATCATCATCACTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C08393g_CDS-001

Protein length: 676 aa.
Product: Conserved hypothetical protein

>YALI0C08393g_CDS-001 MKLSLILAALATSASSLKTVTFKDATGNNVSYVEKPTFDQKKVDAYVLQTEQIVNSTHMD
KCGKCLTAIALGKQAALNGDVQLIPAVLTKLCKMYKFSKTCDTDYGAETTGYDTDGTHAA
QTLTLIGDPYGTDGQYLCYYKVNQACPLPELPKFDLKALGWWGDKPDNVTVPKSENKTFN
VAHLSDLHIDLRYEMGAEANCTEGGKMCCTPDQFNKGARAAGLQEAVVPAQKYGMYTCDV
PPPMIDLTLQTVGQFAKEKEFEFAIFTGDMVSHDVASQTNLANTALSEEAIYHAFKKYMG
DVPVFMTYGNHDTFPYGQLAQHKSGYGGYFVWNDQLSAQLWKDYGWIDAEAEQQAIHTYG
SFATTTKRGLRVISLDSNLWYKKNFYNFWNTSTDPDPSGLFRFLSDELLECEKTGQRAWL
MAHIPPGGNMDNSLAHSTEIIRQIVSRFSNTIAGLFFGHVHEDQFNVWYAGNGSTNTVDN
ALQIAFLGPSVTPLTYYNPAWRYYEVDTKTFEVMNSHTYYAKLNESFAFDFEHPVEKTIG
NFSYLGYPQITNISSEDVNGTAPVYHYEYNAREAYDPDHEWPANAPLNATFWHKAVDYIV
NRNETRDLFLKYEYRQSPYVPKCADDNCLANVYCFLSSGTVPQVEECQKNHKGFKKQIYI
KRDGTYGDEPEHHHH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG