YALI0C08437g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0C08437g

Location

Species Yarrowia lipolytica Positions 1146488..1148330
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1843 (nuc.)
Previous locus YALI0C08415g Next locus YALI0C08459g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C08437g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C08437gYALI0C08437g_mRNA-001YALI0C08437g_CDS-001

Nucleotide sequence

 

>YALI0C08437g
ATGACTCGATTTACTGCCAGGCAGGGCATCAAGGCGCCGCGGAAGCTGGGAAACGCTCAG
AGCGGCGCCGTATTGGCCGCGCGGAAACGGCAACGGCAAGAAATGGACTTTCTGAAGGAG
ATGCGGCAGGTTATGGACCGAGATCATCAGGGTCCCTCGGCGGCGGACTGCGTTCGAGTT
AGAGAAGGAAAGAAGCAGCGGGAGGCAGATCGGTTCAAAGCGGACAATCAGACGGTGCGG
TACCGTCTGCCTACCAAGTCTTGTGACTACCAGCGCAGTATCGATGAGGTTGTGAGCGGG
TTGGCTGCTCGAGTCGATTTTTCGCGGGAGGGACGACGTTTGTCCTTTCTGCGTCGACCC
GCGGCCCCAGAGGTTGGAAGTTCAGATTACGAGGCGTTTGAAGCGACACGAAACAACTTT
TATGCTCAGATGCTTGCGACTCCCCCCAGAAAGGGCGTTTTGGGTGACATTCTACTTCCT
CGAGGGATGCTGGATCAGTTTGCCTCCATTAAGAGTGATTCTGGGGTGGACAGAGACGGC
GAACCGACTGTGGCACACGTGGTTCCGATCATTGAAGGCAAGCCTGTGATCCCCAAGGAG
ATGGAGGGCGTTTCAGACCTAGCAATTTCTTCCAAATGGTACCAGAGAGCATGTCTTCTT
CGATTCCAGGCTGCTTTTGGCACAGATGATCGTCGCTTGCATGGCACATCTGTGCGTGTG
ATGCAGCAACAGGGCCGAAACCGGATCTTCGAACTAGAGACTTTGTTGGAGATAGCTCTA
GCTGAAAGACAAAGACTAGTCGAGAAGGTGGAGGAGGTTTTGAAAGCTGGGTATAAGGAT
CTGGACAGCAAGAGTGTGACAGAGAAAGGCGCTATTGTCTTCGACTTTGATTCCAACTCG
TTCGAACCATTCCAGTATGAAAATGGAGCTGTGAGAAGGATCTACTTCTCTGTCTGTGGC
ATGGGTGCTTCTGAATTTGGACTGGCAGGAAACGTGTCGGTTCCTATGAGTGAGTCTATC
AACAAGCTCATGTGGGAACTGTTCCGACACTCTCTTCGAGTTAGAGGGGTTGGGGAGATG
AGTTCTGATGCTCTGCAGCGGATCCAGGCTCGAAAACAGGCCATTATCGACTACAACAAC
GGCAAATCCAAGAGAAACGTCATCAATGAGCGCATGTTTGACGCAGGAGAGAAGAGGTCA
CTTGAGGAGGAACTCATCAGGGATATTGCTCTGCTTGATCCTCAACCCAAGGGCAAGGTC
AAGAAAGACGCTGTGAAGGTTGTCAATGGAGGTGCCAAGAGGGATACCCCTAGTAGGGCG
CCTAAAGAGACAGAAAAAGGTGATACCAGGGGTTCTAGAGATGGAAGTGCGTCGAATGGA
AAGGGTTCCAACACTAGGGAAATGAAGGCTTCCAACGACTCGAACACTAGAGGTTCTAGA
GGTGTCCAGGAGATCAAGACTCAGACTAGCGACACCAAGAGAGAGGTTGATGAGTTTCTT
ACCATTGAAGACCTCGTCGAACCTTCCGGCAAGAAATCCAACAAGAAATCCAACAAGACA
GCCAGCAAGACAGCCAGCAAGACAGCGAAAAAGACAGTCAGCAAGACAGTCAGCAAGACA
GTCAGCAAGACAGACAAGCCTCTTAGCAAGCCTTCTAATAAGTCTGCATCGGCCACTGTG
GAAGACACGTTCCTTGACATGGACTTTTTGCTAGAAGAGAAACCCAAGAAGCGAAAGGAG
TCAAAGTCCACGAAAAAGAGGCCGCGCAAGGGTAAGAAGTTCTAGAGGTAGAGAGATAAG
GAGGTTGCATTATTGTACATAGATTAATCACGAATGAGAAGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C08437g_CDS-001

Protein length: 595 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0C08437g_CDS-001 MTRFTARQGIKAPRKLGNAQSGAVLAARKRQRQEMDFLKEMRQVMDRDHQGPSAADCVRV
REGKKQREADRFKADNQTVRYRLPTKSCDYQRSIDEVVSGLAARVDFSREGRRLSFLRRP
AAPEVGSSDYEAFEATRNNFYAQMLATPPRKGVLGDILLPRGMLDQFASIKSDSGVDRDG
EPTVAHVVPIIEGKPVIPKEMEGVSDLAISSKWYQRACLLRFQAAFGTDDRRLHGTSVRV
MQQQGRNRIFELETLLEIALAERQRLVEKVEEVLKAGYKDLDSKSVTEKGAIVFDFDSNS
FEPFQYENGAVRRIYFSVCGMGASEFGLAGNVSVPMSESINKLMWELFRHSLRVRGVGEM
SSDALQRIQARKQAIIDYNNGKSKRNVINERMFDAGEKRSLEEELIRDIALLDPQPKGKV
KKDAVKVVNGGAKRDTPSRAPKETEKGDTRGSRDGSASNGKGSNTREMKASNDSNTRGSR
GVQEIKTQTSDTKREVDEFLTIEDLVEPSGKKSNKKSNKTASKTASKTAKKTVSKTVSKT
VSKTDKPLSKPSNKSASATVEDTFLDMDFLLEEKPKKRKESKSTKKRPRKGKKF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG