YALI0C08371g

Overview

Description weakly similar to uniprot|P16151 Saccharomyces cerevisiae YDR414c ERD1 required for retention of luminal ER proteins
Locus type CDS
Locus tag YALI0C08371g

Location

Species Yarrowia lipolytica Positions 1139037..1140256
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1220 (nuc.)
Previous locus YALI0C08349g Next locus YALI0C08393g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C08371g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C08371gYALI0C08371g_mRNA-001YALI0C08371g_CDS-001

Nucleotide sequence

 

>YALI0C08371g
ATGGTGGACTTTTCGACGGCGCCAGAAAATAACACAGACTCATTTGACGTGCACATCAAC
GTGATTCTGCGTATTCTCGTGGCCCTGACCCTCGGCATCTGGGGCTGGGCCCTCAACCTG
CAGATCATGGGCATGTATGGCATTGATGTGGAGACGATCCTGGGTCTCAAATACGCCCGC
CCGGCTTTCAGACCCGTCTATCGACTTGCTCTGTTTGTGTCGATCATGCTGGTGTTTTGG
ATTCTGCTCTTTTGGGTGTCAGTGGCTATCGCACCGTTTGACGTTTCCAAGGCCACTAGT
CTGACGGTTCTAGATGTGTTCCCGTGGGTGGGTCTGTTTGTGTTTATGACGATCATTGGT
GTCGGATGGCGAACGCACGACTCGGGGCGCTTCTTCTTCCTCAAGTCGCTCTTCCGAGTG
TCGCTTGGAGGTCTCAGCCAGCAACACAGAGTCACAGATATCATTCTGTCGGACGCTCTA
ACGAGTTATTCGCGTGTAGTTGCTGATCTGGCTGTCTGTGTTTTGGGCCTGTGGTACGGT
ATTACGTCTATCAAGCGACCTGATCGAGGAATTGGAGGCAGCTGGTTTGTGCCTTGTGTC
ACTGCTGTTCCCTATCTGATTCGATTGAGACAGTGTCTGATTGACTACTCGCGTGACGGA
CGTCACTTCCATCTTGTCAACGCTCTCAAGTACTGCTCTACACTCCCTGTGTTGGTTCTC
GGTACTCTGATGAAGACTCATCCCGTGCATAACGTTTGGCTCGTGGCAGCACTGATCAAC
TCGTCCTTCTCCTTCATCTGGGACATTAAGTGCGATTGGAACCTTTCAATTCTACAGGAC
CTCTGGGACGGTGAGCTCAACAATGGGGGGCTACGAAAGACGCTTGTGTACCCCAAGTGG
TGGTACTATACAGCCATGGTCGTGGATCTCGTGCTGCGATTCACATGGACACTCAAATTC
ACATCGTCCTGGAGTCACGTGCATGACTACGAGGCCGGAATTTTTGTATTCCAGCTTCTA
GAAATTTCGCGTCGGTGGATGTGGATTTTTTTTCGGGTTGAGAATGAGTGGGTTAAGGCC
GTGGATAGTGGAGATGTGAGGGTCCTCGAGGGAGGTATCCAGATGCGGGGAGAGCACGAG
GATTAGAAAGCGAGAGATGGAAAAAGACAATGGATACAACGGGCTTTTACTAAGCCGTAT
GTAGAATAAAGACAATTTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C08371g_CDS-001

Protein length: 382 aa.
Product: Conserved hypothetical protein

>YALI0C08371g_CDS-001 MVDFSTAPENNTDSFDVHINVILRILVALTLGIWGWALNLQIMGMYGIDVETILGLKYAR
PAFRPVYRLALFVSIMLVFWILLFWVSVAIAPFDVSKATSLTVLDVFPWVGLFVFMTIIG
VGWRTHDSGRFFFLKSLFRVSLGGLSQQHRVTDIILSDALTSYSRVVADLAVCVLGLWYG
ITSIKRPDRGIGGSWFVPCVTAVPYLIRLRQCLIDYSRDGRHFHLVNALKYCSTLPVLVL
GTLMKTHPVHNVWLVAALINSSFSFIWDIKCDWNLSILQDLWDGELNNGGLRKTLVYPKW
WYYTAMVVDLVLRFTWTLKFTSSWSHVHDYEAGIFVFQLLEISRRWMWIFFRVENEWVKA
VDSGDVRVLEGGIQMRGEHED*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG