YALI0C08118g

Overview

Description highly similar to uniprot|Q9UUM7 Schizosaccharomyces pombe Protein hob3 (Homolog of Bin3)
Locus type CDS
Locus tag YALI0C08118g

Location

Species Yarrowia lipolytica Positions 1074210..1075177
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 968 (nuc.)
Previous locus YALI0C08096g Next locus YALI0C08140g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C08118g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C08118gYALI0C08118g_mRNA-001YALI0C08118g_CDS-001

Nucleotide sequence

 

>YALI0C08118g
ATGAGCTGGAATGGATTCAAAAAGGCGATGAACCGGGCGGGCACGTCGGTGATGATGAAG
ACGGGCCACGTGGAGAAGACGGTGGACCGGGAGTTCGAGACCGAGGAGCGTCGATATCGA
ACCATGGAGACGGCGTCCACCAAGCTGAACAAGGAGGCCAAGGGCTTTCTGGACTCGCTG
CGAGCCATGACGTCGTCGCAGACGCGAATCGCAGAGACCATTGATGCGTTTTACGGCGAC
GCTGGCACCCGGGACGGCATTTCCAAGTACTACTTGCAGGCTGTCCAGGAACTGGATGCC
GAGACCGTCAAGGCTCTGGATGGCCCCTACCGAGAGACGGTGCTGGATCCCATCACGCGA
TTTTGTGCTTACTTCACTGACATTAACGAGGCCATCAAAAAGCGAAACCACAAGCTGATG
GACTACGATGCTCTGAGACACAAGACCAAGAAGTTGATTGAAAAGCCCAGCAACGATGCC
GCGCGTCTTCCTCAGGCAGAGAAGGAAGAGCAGATGGCCAAGGAAATGTACTCTCAGATC
AACAACCAGCTGATTGAGGAGCTGCCCCAGCTGATCGACCTGCGGGTTCCTTACCTGGAT
CCCTCGTTCGAGGCTCTCGTCAAGATCCAGCTGCGATTCTGTACAGAGTCGTATACCCGT
CTGGCGCAGGTGCAGCAGTATCTGGACGCCAGCAGTCGAGAGGAATACGCTAACGGCCAG
TTGGACGCCAAGGTGGAGGATCTACTGCAGAACATGAGAGAGTTGAGCATTACTAGTTTG
GGAACTAAATAGGCTCATCGAATTCATACAATGAATGAGCGGGCCTATTGAGCAAACTCA
TCTGCTTGTAGTGAGTGTGCCATGGTCTGGTAGGCTGTTGGCCGGCAAGACGGTTTTCGC
TAACCCATGCGTTTGGAAGCGCAGAGTGGACGAATATGTATAATGAATATATGATAAGCA
TGAAGTCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C08118g_CDS-001

Protein length: 264 aa.
Product: Protein hob3 (Homolog of Bin3), putative

>YALI0C08118g_CDS-001 MSWNGFKKAMNRAGTSVMMKTGHVEKTVDREFETEERRYRTMETASTKLNKEAKGFLDSL
RAMTSSQTRIAETIDAFYGDAGTRDGISKYYLQAVQELDAETVKALDGPYRETVLDPITR
FCAYFTDINEAIKKRNHKLMDYDALRHKTKKLIEKPSNDAARLPQAEKEEQMAKEMYSQI
NNQLIEELPQLIDLRVPYLDPSFEALVKIQLRFCTESYTRLAQVQQYLDASSREEYANGQ
LDAKVEDLLQNMRELSITSLGTK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG