YALI0C08140g

Overview

Description some similarities with uniprot|Q01870 Penicillium chrysogenum regulator protein wetA-Penicillium chrysogenum
Locus type CDS
Locus tag YALI0C08140g

Location

Species Yarrowia lipolytica Positions 1088176..1089295
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1120 (nuc.)
Previous locus YALI0C08118g Next locus YALI0C08162t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C08140g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C08140gYALI0C08140g_mRNA-001YALI0C08140g_CDS-001

Nucleotide sequence

 

>YALI0C08140g
ATGTCTGCGGCTCAACTGGACTTCTACTACGATATCGACGACGACTTGGGCGCTCTGACC
CAACCCACCTCCAGCCACCACCACATGGTCGCCCATACACATCTGGCCCATAACTTGACC
CAGGCACACCCTCAGTCGGCCTACACAACCCCAGACCTGTACATTTACTCCAACTACCCG
TCACACACCAGCCACGTGACCTCAGACGCCCGCGACAACAGCAGCCGGCACTTTACTCCC
TACTCCAACTCCAGCTCCAATGCTTCTTCTACCTCTGTTGATTGTGCCACTACCTCGACT
AGTCACACCCAAGGAGACTCTCCCCGATCAACACAACTACTGACCCAACCCATACCCAGC
TCCTCTGCTCCCCAGGTGCTCACGCCGACCACGTCAATCACTTCTTCGGCTCTCACTACC
CCCACCTCTACCCTCACTTCTCCGCCTTCTTCGGCTACTTACCCTCTTCCTTCCGTGCCT
CGAAAGAGAAGCGTGGAGTTCATCAGCCACGAGATTAGCAACACTAGCGGCGCTCCTCTG
GTTCTGAGTCAGCCTCCCAAGCGTAACCATGCCAACAAGCGTCACGTGAGCGACGCGGGT
ATTGTCCCCAACTCGGAACCCATTTACTACTACCCCAATCTTGTTTCTCCAGCAACAGAG
ACCTACGACGAGTACCCCACAACTACCATTTATGATTCTATTCAGGAAGAAAACCAGACC
GTCCCCGTGACCAGCCACATGACTTCCCATCCCGTCATGTGGAACCCTGCCTACACCGTT
CTCCCCAGTCAAAAGGTGTATCAATCTCGCGACAGACACAATTCCGACTATGGCTACGAC
TATGGCTATGACCAGATGCGACGAGTTTCTGGGAGTGGGTCTGAGTCGCGAAAGACGTCG
GAAACAGGCTCTTCCACCTCGGAGCAGGTGGCATCGGGTTTCATCAACTACACCCAGCGA
GATGGGCCCAAGCTGATGACTGGAGTGGCCCCGTCGGGGGCCCAGAAAACCAAGCAGAAG
CGAGAAGCGGAGGCCCGAAGGCGAGAGGCCGAGCGACGTGAAAAGGGATATTACTAACGG
GTATTTATAGATAATGCATTAATCAACCAAAAGTAAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C08140g_CDS-001

Protein length: 359 aa.
Product: Conserved hypothetical protein

>YALI0C08140g_CDS-001 MSAAQLDFYYDIDDDLGALTQPTSSHHHMVAHTHLAHNLTQAHPQSAYTTPDLYIYSNYP
SHTSHVTSDARDNSSRHFTPYSNSSSNASSTSVDCATTSTSHTQGDSPRSTQLLTQPIPS
SSAPQVLTPTTSITSSALTTPTSTLTSPPSSATYPLPSVPRKRSVEFISHEISNTSGAPL
VLSQPPKRNHANKRHVSDAGIVPNSEPIYYYPNLVSPATETYDEYPTTTIYDSIQEENQT
VPVTSHMTSHPVMWNPAYTVLPSQKVYQSRDRHNSDYGYDYGYDQMRRVSGSGSESRKTS
ETGSSTSEQVASGFINYTQRDGPKLMTGVAPSGAQKTKQKREAEARRREAERREKGYY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG