YALI0C08096g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0C08096g

Location

Species Yarrowia lipolytica Positions 1066286..1069786
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 3501 (nuc.)
Previous locus YALI0C08074g Next locus YALI0C08118g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C08096g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C08096gYALI0C08096g_mRNA-001YALI0C08096g_CDS-001

Nucleotide sequence

 

>YALI0C08096g
ATGGAGCACTTCACTGCGCACGATGGGTCGTTCCAGTTTCCGGACTCGCTTTTCCCCGAG
GTCCAGACGCCGTATCCGGCTCTTCCGGCTGCTCCCACTGACAAAATCGACACTCTCAAA
GCGGTCTACCAAACGAGCATAGTGGCCACCCAGACCGGTCAGGGCTCGTCACAGCATCTT
TCGCAGTTCTTCCGATGGGCCCGGGATGTTCTGGATCTCCACGAGCTCCACTATGGCCTT
GGAGAGGCAGAGGTTGCGTTTGCCAAGACGGTCGTTCAACACACAGCATACTCGGAGAGC
TCAGAAGGCGCGAAAAGTCCGTTTACAGGCGCAGCACACTATCTTCTGGGTCTGTCTTCG
TTGTTTGGAAGCAGCGATGCTTCTGGCGGCTCAGCTGCTGCTCTAGAGCACTTCAAAATG
GCTGCAGCCAACGGATTTGCCAGATCGTACTACCGTCTGGCGGTGGAATTTGAATCACGA
GGCGACGCAGTTCATTGGAAAGAGTGTTTGGATCGGGGAGCGGCCAAGGGAGACTCTGCA
TGCTGCTTCAGACTGGCCATGGCTCTGTTTCAGGGCCAACTAGGTCTGCAGAGAGATCCC
AATCTTGCTTACGAACTACTACAATCAGCTGCTCGAGTCTCAGATCCCGATTCACCCCAA
CCCAGTTATGTTCTCGGCCTGCTGTTGCTGGGAGAGCTACCTGCTATCCGTATAGATGGA
TGTGCCGAGCTGGAGGATGCTGTTTCCAACCCTACAGCACAGACGTCTCATATGGCCTTC
AAGAACCTGGAACGGTCAGCCTGGCTGGGATTCGCCCCTGCTCAGATCCGCATGGGACGT
GCCTGGCAGGGAGGAGGAAAGGGATTCGATTCGGCTATTGCTCTGCGGTACTTTCACCAT
GCTTCCAGACACTACCTGTACCAGTGCTGGAGACAGAAAGATGTGTCTCAAACCAGTGGA
GAAGCCGAGTTGGAGGTCTCCAAGTGGTTTCTGTCGGGCTGCGAGATGCATCTGGAGGCA
AACGAGCCCTGGGCCTTCCGTTTTGGTCATGTTGCAGCCCAGGCCGGCAATACTACTGCT
GAATTTGCTCTCGGGTACTTCTATGAGGTGGGTATCTCTGTCAAAAAGAGCACTGTTGAC
GCCAAATACTGGTACACGGAGGCTCTTCGACATGGATTCACTGAGGCACGTAACCGTATT
GACCAGATGGAGGAGTCTCCTCTAGATAAGAGTCATCATCAGAAGCGTTTGTCTCTGCGA
AGAAGTAATACCAAGCGCTTGAAGGACGAGTTTAAAGAGAAGCTGCGAAGTGGGCGGGGC
GGCAGACCTCTGAGATCCTATTCTGTTGCCGATCCCGAGAATCAGGCAGCTGACAACCGA
GCTGGGGAAGTCTCTCTCGAGTTGGAGGAGGTAGAGGAGGGTGTCGAGGAGGGTTCAACA
CTGGATAAGGCTGAGGATGCCAAGGAAGCTTCGGGAGACGCATCTGATGTCGCCGACCTC
ACTGTCCCAGTTGGATCGGTCATGGCGAGTCTTCAAAATCTCCAGATGAAGGACACCTCT
CAATCTGCCGACAGAATGCTGGACAGAATCAAGGAGATGAAACTGGAAGAGGAGAGGAGG
CTAGAGGAGGAGAAGCGGCTAGAGGAGGAGAAGCGGCTAGAGGAGGAGAAGCGGCTAGAG
GAGGAGAAGCGGCTAGAGGAGGAGAAGCGGCTAGAGGAGGAGAAGCGGCTTGAGGAGGAG
AAGGCAGAAGCTGAAAGGAAACAGCGGGAGGAGGAAGAGAGGCAGCGACTCATTGAACAG
GCCAGACAGGAGGAAAATGCGCGCCGAGAGCTCGAGGCCAAACGACTTGCTGAGGCGCTG
GAGAGGGAGAGACTTGAAGAGGAGCAAAGGTTGGAGCGAGAGAGGTTAGAGAAGGAACAA
CAAGAGCAAGAGGAAAAGGAAAGACACGAACAGCAAGAGCGAGCAGAGAGAGAAAGACAA
GAGGCGGTGAGAAAACACAACCTCAACAAGGAACGATTTTCTGATGCCTCTACCGAGTCT
TCTGTTGAGCAGTCCCCCACACCTTCTCCTGATACACTTACCTCCATATCAATGGAAGAG
CAGCTGCAAGAAGCAGAGAGAATCCACAAGGAGGAGCAGCGACGACTACGGAAGGAACAC
AAGCGAGCACTCAAGAAACGGGCTCAAAGTGAACGTCTTTCGGCTCCCGTTCAACCTCCT
CCCCCTCCTCCTACTATTCCCACATCTGCTCCTGACCTGAGACGTGAAAAGATGCTTCAG
AATGTCAGACAACGGGTTTCGTCCGAGAGTGTGAACACCGTCACGAGTGCAAGCAATAGT
ACTCCACCCGCACCTACCGAGTCTGCTCCTCTTCCTCCTCCCCAGCGACACAAACATCGT
GTTTCCAGTATGATTCTTGACTCCGATGTGGCAAATGCCAACCACAACAACAGCGACGGA
TCTACACCTACCACTCCAATTACACCTCTCACGGCCTCCCTTAGAGACATTGTCATTCCC
CCTTCCGATTCCAGCAGTCGGTCTACTACGCCTCATTCGGGTCACTCTACACCCCGAAAA
CCTGTTTCCAGAAGCGGAACAGACACGGATCTGGCCGGAAGAGTGGTGATGAACAATATG
GCTTCTCCGGAGCGTCGTGGAAGACGCCATGAGCGAGCCAGAACCTCCTACGATATTTCT
GCTGACATGGAAACTCCTCCAAGATTGTGTTCTCCTGCACATGTGGGAGCTGCAGGAGGA
GCTGCAGGGGGCAAACGGCTTGTTTCCACACCTGCAGGGGTCGGATCTGCTCCTTCCACG
CCTGGAATGGGTCCTGGCTCAGGTCCTTATGCCGATTACTCTCCTCCTGTGCCTCCCAAG
GACTCTCCCTTTGACAGATCGACCTATTTCGACCGGTCCATCTCGCCCACTAAGAACAGA
GCAGGCTCCCCCTCTGGCCGCGTCAGCAGTCTGTCTGCTGTCGAGATTTCAAACAAACTG
AAGAAGTTTGCCGGCAAGATTGTACCTTCCTCACCTCCCAAACGAGGTGCCGAGTTTGAA
AGCCCGTCCAGAAGCATGTCACCAGTCAAGGACCGAGTGGCGTCCTCACCTAACCCTGGA
CGGCCCATGTCGGCTCTATCTGGCCATTCGGACACCTCCCGATCGTCTTCTCCTGTCGAT
TCCATCATGTCACATTCTCGTTCGTCCACTATGATGACCTCTTCCTCGGGATCTTCAGGT
AACAGTATGCTCTCGGGCTTCATTCCCAACATGAGCATGCCCAGTATGCCAAACGTGAAA
CTGCCCAGGGCCAGCAGCCCCCTCAAAAACCCGCTGTCGGCTAAAGATTTGCAACACACT
CCGGTCGAGCCTGCTCCCCCTAGAATTCTGCATGGAACAGGCAAAGGACCAAGGACGTTT
GAAGAGATGGGCATTAATCCGGTGACCAAGGAGGCCGACGATTGTGTTATTATGTAATGT
ATGATATCAGTATTTAATCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C08096g_CDS-001

Protein length: 1159 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0C08096g_CDS-001 MEHFTAHDGSFQFPDSLFPEVQTPYPALPAAPTDKIDTLKAVYQTSIVATQTGQGSSQHL
SQFFRWARDVLDLHELHYGLGEAEVAFAKTVVQHTAYSESSEGAKSPFTGAAHYLLGLSS
LFGSSDASGGSAAALEHFKMAAANGFARSYYRLAVEFESRGDAVHWKECLDRGAAKGDSA
CCFRLAMALFQGQLGLQRDPNLAYELLQSAARVSDPDSPQPSYVLGLLLLGELPAIRIDG
CAELEDAVSNPTAQTSHMAFKNLERSAWLGFAPAQIRMGRAWQGGGKGFDSAIALRYFHH
ASRHYLYQCWRQKDVSQTSGEAELEVSKWFLSGCEMHLEANEPWAFRFGHVAAQAGNTTA
EFALGYFYEVGISVKKSTVDAKYWYTEALRHGFTEARNRIDQMEESPLDKSHHQKRLSLR
RSNTKRLKDEFKEKLRSGRGGRPLRSYSVADPENQAADNRAGEVSLELEEVEEGVEEGST
LDKAEDAKEASGDASDVADLTVPVGSVMASLQNLQMKDTSQSADRMLDRIKEMKLEEERR
LEEEKRLEEEKRLEEEKRLEEEKRLEEEKRLEEEKRLEEEKAEAERKQREEEERQRLIEQ
ARQEENARRELEAKRLAEALERERLEEEQRLERERLEKEQQEQEEKERHEQQERAERERQ
EAVRKHNLNKERFSDASTESSVEQSPTPSPDTLTSISMEEQLQEAERIHKEEQRRLRKEH
KRALKKRAQSERLSAPVQPPPPPPTIPTSAPDLRREKMLQNVRQRVSSESVNTVTSASNS
TPPAPTESAPLPPPQRHKHRVSSMILDSDVANANHNNSDGSTPTTPITPLTASLRDIVIP
PSDSSSRSTTPHSGHSTPRKPVSRSGTDTDLAGRVVMNNMASPERRGRRHERARTSYDIS
ADMETPPRLCSPAHVGAAGGAAGGKRLVSTPAGVGSAPSTPGMGPGSGPYADYSPPVPPK
DSPFDRSTYFDRSISPTKNRAGSPSGRVSSLSAVEISNKLKKFAGKIVPSSPPKRGAEFE
SPSRSMSPVKDRVASSPNPGRPMSALSGHSDTSRSSSPVDSIMSHSRSSTMMTSSSGSSG
NSMLSGFIPNMSMPSMPNVKLPRASSPLKNPLSAKDLQHTPVEPAPPRILHGTGKGPRTF
EEMGINPVTKEADDCVIM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG