YALI0C07953g

Overview

Description highly similar to uniprot|P46598 Candida albicans CaHSC82, Heat shock protein 90 homolog
Locus type CDS
Locus tag YALI0C07953g

Location

Species Yarrowia lipolytica Positions 1051234..1053401
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 2168 (nuc.)
Previous locus YALI0C07909g Next locus YALI0C07975g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07953g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07953gYALI0C07953g_mRNA-001YALI0C07953g_CDS-001

Nucleotide sequence

 

>YALI0C07953g
ATGTCAGACGCCGACAAAAAGTCCGAATCCTATGAGTTCACAGCTGAGATCTCTCAGCTG
ATGTCTCTCATCATCAACACCGTCTACTCCAACAAGGAGATTTTCCTGCGAGAGCTCATT
TCCAACGCTTCCGATGCTCTGGACAAGATCCGATACCAGGCCCTGTCCGACCCCAAGCAG
CTGGAGACCGAGCCCGAGCTCTTCATCCGACTCACCCCCAACAAGGGCCTCAAGACCTTT
GAGATTCGAGATACCGGTATCGGTATGACTAAGGCTGATCTCGTCAACAACCTGGGTACA
ATTGCCAAGTCCGGCACCAAGTCCTTCATGGAGGCTCTCTCCGCTGGCGCCGACGTGTCC
ATGATTGGTCAGTTTGGTGTTGGTTTCTACTCTCTTTTCCTGGTTGCTGACCGAGTCCAG
GTCATCACCAAGCACAACGACGACGAGCAGTACATCTGGGAGTCTTCCGCCGGTGGTAAG
TTCACCATTACTCTCGACACCGTCAACGAGCGAATCGGCCGAGGTACCGTTCTGCGACTC
TTCATGAAGGAGGACCAGCTCGAGTACCTTGAGGAGAAGCGAATCAAGGATGTTGTCAAG
CGACACTCCGAGTTCGTCTCTTACCCCATCCAGCTTGTTGTCACCAAGGAGGTTGAGGTC
GATGCCCCCTCTGCCGACAAGGTTGAGAAGGAGCTCGATGCCGACTCCGAAGATAAGAAC
CCCAAGATTGAGGAGGTCAAGGACGAGGACGCCAAGGACGAGAAGCCCCAGAAGATCAAG
GAGATGGTCACCGAGAACGAGGAGCTTAACAAGGTTAAGCCTCTGTGGACCCGAAACCCC
GCTGAGGTCAAGCCCGAGGAGTACGCTGCCTTCTACAAGTCTATCTCTAACGACTGGGAG
GACCACCTTGCTGTCAAGCACTTCTCCGTCGAGGGTCAGCTCGAGTTCCGAGCCATTCTC
TTCATTCCCAAGCGAGCTCCCTTCGATCTCTTTGAGTCCAAGAAGAAGAAGTCTAACATC
AAGCTTTACGTCAAGCGTGTCTTCATCACTGATGACGCTGAGGAGCTGATCCCCGAGTGG
ATGGGCTTCGTCAAGGGTGTTGTTGACTCCGAGGACCTGCCTCTTAACCTGTCCCGAGAG
GTTCTGCAGCAGAACAAGATTCTGAAGGTCATCCGAAAGAACATTGTCAAGAAGCTGATT
GAGGCCTTCAACGAGATTGCTGAGGACCGAGAGCAGTTCGACAAGTTCTACACTGCCTTC
TCCAAGAACCTCAAGCTCGGTGTCCACGAGGACTCCCAGAACCGACAGGCTCTTGCCAAG
CTCCTGCGATACAACTCCACCAAGTCTTCCGACGAGCTTACCTCCTTCGAGGACTACATC
ACCCGAATGCCCGAGCACCAGAAGAACATTTACTTCATCACCGGTGAGTCCATCAAGTCC
GTTGAGAAGTCTCCCTTCCTCGACGCCCTCAAGGCCAAGAACTTTGAGGTTCTGTACATG
GTTGACCCCATTGACGAGTACGCCATGGCCCAGCTCAAGGAGTTTGATAACCGAAAGCTG
GTTGATATCACCAAGGACTTCGAGCTTGAGGAGACCGAGGAGGAGAAGAAGCAGCGAGAG
GCTGAGGACAAGGAGTTCGAGCCCCTTGCCGCCGCCCTCAAGGAGATTCTTGGCGACCAG
GTCGAGAAGGTTGTTGTGTCCCACAAGCTTGTCGACGCTCCTGCTGCCATCCGAACCGGC
CAGTTTGGCTGGTCCGCTAACATGGAGCGAATCATGCGAGCCCAGGCTCTGCGAGACACC
TCCATGTCTGCCTACATGGCCTCCAAGAAGACCTTTGAGATTTCTCCCAAGTCTCCTATC
ATCAAGGAGCTGAAGAACAAGGTTGAGGCCGATGGTGCTGAGGACCGAACTGTCAAGGAC
CTCACCACTCTTCTGTACGAGACTGCTCTGCTGACCTCCGGCTTCACTCTTGATGAGCCC
GCCAGCTTTGCTTCTCGAATCAACCGACTCATTTCTCTCGGTCTCAACATTGACGAGGCT
GAGCACGAGGCTTTTGCCGAGCCCACCCCCAGCACTGAGGACAACTCTGCCAGTGTTATG
GAGGAGGTTGACTAATGTATATAGCATAATGAGATGATTAGATATGAATATGCAAAGCGT
TATCGATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07953g_CDS-001

Protein length: 705 aa.
Product: Heat shock protein 90, putative

>YALI0C07953g_CDS-001 MSDADKKSESYEFTAEISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPKQ
LETEPELFIRLTPNKGLKTFEIRDTGIGMTKADLVNNLGTIAKSGTKSFMEALSAGADVS
MIGQFGVGFYSLFLVADRVQVITKHNDDEQYIWESSAGGKFTITLDTVNERIGRGTVLRL
FMKEDQLEYLEEKRIKDVVKRHSEFVSYPIQLVVTKEVEVDAPSADKVEKELDADSEDKN
PKIEEVKDEDAKDEKPQKIKEMVTENEELNKVKPLWTRNPAEVKPEEYAAFYKSISNDWE
DHLAVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKSNIKLYVKRVFITDDAEELIPEW
MGFVKGVVDSEDLPLNLSREVLQQNKILKVIRKNIVKKLIEAFNEIAEDREQFDKFYTAF
SKNLKLGVHEDSQNRQALAKLLRYNSTKSSDELTSFEDYITRMPEHQKNIYFITGESIKS
VEKSPFLDALKAKNFEVLYMVDPIDEYAMAQLKEFDNRKLVDITKDFELEETEEEKKQRE
AEDKEFEPLAAALKEILGDQVEKVVVSHKLVDAPAAIRTGQFGWSANMERIMRAQALRDT
SMSAYMASKKTFEISPKSPIIKELKNKVEADGAEDRTVKDLTTLLYETALLTSGFTLDEP
ASFASRINRLISLGLNIDEAEHEAFAEPTPSTEDNSASVMEEVD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG