YALI0C07975g

Overview

Description weakly similar to uniprot|V5F9Z1 Byssochlamys spectabilis PVAR5_1684 Guanyl-nucleotide exchange factor
Locus type CDS
Locus tag YALI0C07975g

Location

Species Yarrowia lipolytica Positions 1056666..1060635
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 3970 (nuc.)
Previous locus YALI0C07953g Next locus YALI0C08030g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07975g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07975gYALI0C07975g_mRNA-001YALI0C07975g_CDS-001

Nucleotide sequence

 

>YALI0C07975g
ATGCCTCTGATACGGAGGAAAAAATCGGTCATGGCTTCGCCGACCCGGTCGGACGACTCG
GACCGCCGTCGCAGCCCGTCGCACGACACGCTCGCGCCTACCACGGTGCTGTTCAAGGAG
TCGGACAAGGACAAGCTGAGCAGAAGTAACACCGACGAGGTCAATGTCGCGGTTCCGACC
ATCTCTCTGACGTCTCCGGACGGCCGTCGCAGCGCCAGCGCCAGCAGAACTACTTCGACA
TCCACACTCACCAACTTGGGCCACACTTTGAGACGGACCGTGAGTCCCAGTAAGGCTGCT
CCGGAAGAGACTAAGGAGAAAGACTCCAAGGACAAGGACCGGGAGCGGTCGTTTTCGCTA
GGATTCAACAAAAAGAAGGACGCCGACGGACCACGTGGCCGCCTACAATTCAGGTCCAAC
TCGTCCTCCACCGTGGCATCTCTGCTGGGCTTTGCCAAGTTCAGAAAGGACAAGGAGGAA
GGCTCCGGCACACCGTCCAGATCCCAGACCCCGACACAGACTTCGACTCAAACACAACAA
CCAACGCCACCCACGACACAATCGCCGCCATCGACAGCTGCAGCGGGCACACAACTGCCA
CCGATTCCAACCCTGCAGGCTGGAGGCAGCTCACTACTATCAGACACGGACAGCGACAAT
GACTCGGAAAGCAGTCACCGACGAGGTGTTAGCGTGAGCTCTGCCACCGGCTCAATGGCC
CAGTTGGGTGCACACAACTACGCCCAATGGAGTCAGTCCCTGAAGACCATGGGTGCGCAC
AGCACAGGAGGAAGCGGAGGAGCCAGCGCAACAAGTACTGGAGCCAGCAACCACAGTGGT
GGCGTACTGGGTGGTCCTACTGTTCATAGTGCACCGCCCACGCGAAGTAGTACAGGGTCT
GTTACTGCTTTGTTGGAGGAGGAACCTACGAAAACTACTACCCGACGACCCAGTACCCCC
AACCTGAGCAGTAATGGCTCATCGCTGATGCCCCCGCCTCCTCCCACAGGTTTCGCACGA
TTCCGTCGAAAAACAGCGTCCATGCTGTTCAACTCGGATGATGAGGAGCCCGCCAGACCA
CCAGTATTCCGGTCTCTTTCCTCCCAGTCTATTAGAGGAGATCGCCAAAAGGAAGAACGA
CAGAAGGAGGCACAGAAGGAGGCACAGAAGGAAAAGGACGACAAGGAGGGCGGTAGTGGA
GGTAGTGTCGGCGGCTCTGGAGGCCTGGACTCCTCAGTCCAATCTCTGGAGAAACCCAGA
TCGGAGTCTGTATCCGCAGTCTCCGCAGCATCAGGGACCTCATCGACCTCCAACCAGTTC
CTCACGACACCCTCGTCTTCCACCTTCCCCAACTCTCCCTCTCTCTCGTTCCAGGACCTG
CCCTTTTCTTCCCGACCTCGAAGCAAAACCATGCCTACTAGTGGCGGTCCTCCCAGCGGT
GCGACCTCTGAGAAGGTGCTTGATTCGTCCAAGTCAGCGTCTTACTCGCCTAGAGAGTCC
GTGGAAGACATCCAACTACCCCCAATCAACGACCGGACGCCTAAGGAGTACATGGCCGCG
ATTCGACAGCTCAACATGCATGGCCAGACGGCCGCTCTGCTGTGCTCTCGCGACTCAGAC
TTTTACCGCGAGTGCATGGCTATTTACTCTTCCGAGTTTGACTTCACCACGGATCCTATC
GACATGGCTCTGAGAAAGTTTCTCATGTATGTGGTGCTCCCCAAGGAGGCCCAGCAGATT
GACCGGATTCTGGACGCGTTTGCGACCCGGTACGACGAGTGTAACCCAGGTATTTATGCC
GATGCTGAACTGGCTTATGTGGTTGCTTTCTCTCTTATGATCCTGCACACGGACTCCTTC
AACAAGAGTAATAAGCACAAGATGCAGAAGAGCGACTACATCAACAACACATTTGCAGAA
GGTGTTTCACCAGACATTCTGGAGTGCTTCTACGACAACATTACATACACACCGTTTGTA
CACACCGAGGAGGAGCCTGGCCACGACAAGAAGACACTCGTGGCGCAAAAGAAGACGTCG
TCGTTCAACATTCGAAGCGACAAGAATCTGATTGACCCCTATGCTCTGATTCTGGAGGGC
AAGCTAGACTCTATTAGACCATCTCTGGATGACGCCCTGTCTCAGGACTGCCCTTACTCG
TATGAGGCCCCTGAGTCACGTGATGCTTTCCATGCCGTGCGTCTCGCCTTTAGCAACGGT
GCGTCTCTCCAATTGACATCTTCCCGGTCTCGTCCCGGAGCGTTTCTTTCTCAGGATACC
ACTGACAACCCACTTATGGCGGACCCTGGTGTTATTGATATCAAGATCGCCAAGGTTGGT
ATTCTATTTCGAAAGGAGCAAAAGCGGGTTCTTTCTACCGCTCGGTCGATTTGGAAGGAG
TGGGGTGCTATTCTGACTGCGTCTCAACTGTATCTCTTTAAGGAGACGCAGTGGATCAAA
AGTATTTTGAAGGATCTGGAAGCTGGGCGTCACGTGATTTCAGCCAACGACCAGTTCCAT
CCCACAATCACTCTTTCCACTACCGGAATGGTTGCTCTTCGGAACTCATCCACCTCCGCG
CCTCCCAAGACTTCACGAAAGGTCCCGTTTGTGCTTTCTGCAAAGTCTTTGGGTCAAGAG
TGGATCGCTGCGGCTTCCGAGACTGACACAGCCGAGTGGACGCATTTGATCAACTACTCG
GCTGCTTTTGCGAGCCACAGTATAAATCCCAACCCTGGTACTGGGTTGAACTCCTCTTTG
ACGGCCGCCTTGTCACAGGACATTCATACGTCCCGACGACTGGCAATGGTGGATGCCCTC
CATACACTCGAAGAGAAGGTTGGAGCTGTAGAGATTGAGGTGGACGGGCTTCTCCGTAAT
GCTCGGCATCTCAAACTCATGGCCCCCATTCAACAGCGAACTCGATACCATGTCAACTTC
TGCGCTGCCCGGTTGTCTGCCAAACTCGACTGGCAGTGGCTTGATTTGACGAAGTACCAG
AGTTACCGACTAGTGTTGACCAAGGAGCTGGAGGAGGAGCAGGAGTGGCAGTTGACTGGC
GGTGCTGAGACTGCCGAAGAGGCCGATATGGAAGAGACCAAGTTGGAGCCCACTCAGTCG
ACCACGACCACTCTTTCAATTGCATCTTCTTCTTCGGCTGTTTTGTCTGGCTTCCCTAAG
ATGGAGATCACAACCACCAGTAGCGAGGACGATGATGGTGATTCGGACGAGTCCCAGCAA
ACCAATGACTCGTTCATTTCGTCTCTTTCGCCTTCACAGGCTCTCTCTTCTCCTTCTCAG
GGAGTCGATTTATCTCCTTCGCAGCCCTCTATCGACTCTGCCGAGTTTGAGGGCTTTGAG
GAGTGTCTGCCCGTCAAGAGTGGTCGAAACAGCTTTTTGTCTACTACCACAGCTATTCCT
CGGCCGGATTCGTCTCTCTCGTCTCGTTCTTCTCTTCAGCCCACTGTTTCTAACGGTTCC
AAGCAGGATCGGTTTTATGAGGTTCGAGAAAGCATTCTGAGAGACACCGCCCCGAGTGAT
CGGTCTGATGGTGATACTAGGTCGTCGTCGCTGGATCTGCCCAGAAAGGCGTCTCGGTCT
TTATCTCTGAGCAGATCATCTGGTGATCTCCGTTCAGGTGAGAATAGTCCTCTCAAACCG
TCCATGAGTGTTCGGAAGCTGCGAACCGGTCTTCGAAACGGCTCAGATTCCCCCGGACGG
GAAGTTTCGCCTGTTCGAGCTGATAATCCGTCCATTGAGCGATCGTCGTCGCTGCTCAGA
GGCTCGGACTTTACTTTGCACGGTAAAAAGTTTTCTGTTGTCGAGGTCAATCCCCAATTT
GCCGCCACTCCCCACCATAAGAGAACCACCAGCAGGAGTGAGCGCAAGGAGGAGAAGAAG
GGGGAGAGTGAGCCCTAGGGCTGACAAAACAATAGCATTATTTATTGAATTAAAATGATT
TATGAACTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07975g_CDS-001

Protein length: 1306 aa.
Product: Conserved hypothetical protein

>YALI0C07975g_CDS-001 MPLIRRKKSVMASPTRSDDSDRRRSPSHDTLAPTTVLFKESDKDKLSRSNTDEVNVAVPT
ISLTSPDGRRSASASRTTSTSTLTNLGHTLRRTVSPSKAAPEETKEKDSKDKDRERSFSL
GFNKKKDADGPRGRLQFRSNSSSTVASLLGFAKFRKDKEEGSGTPSRSQTPTQTSTQTQQ
PTPPTTQSPPSTAAAGTQLPPIPTLQAGGSSLLSDTDSDNDSESSHRRGVSVSSATGSMA
QLGAHNYAQWSQSLKTMGAHSTGGSGGASATSTGASNHSGGVLGGPTVHSAPPTRSSTGS
VTALLEEEPTKTTTRRPSTPNLSSNGSSLMPPPPPTGFARFRRKTASMLFNSDDEEPARP
PVFRSLSSQSIRGDRQKEERQKEAQKEAQKEKDDKEGGSGGSVGGSGGLDSSVQSLEKPR
SESVSAVSAASGTSSTSNQFLTTPSSSTFPNSPSLSFQDLPFSSRPRSKTMPTSGGPPSG
ATSEKVLDSSKSASYSPRESVEDIQLPPINDRTPKEYMAAIRQLNMHGQTAALLCSRDSD
FYRECMAIYSSEFDFTTDPIDMALRKFLMYVVLPKEAQQIDRILDAFATRYDECNPGIYA
DAELAYVVAFSLMILHTDSFNKSNKHKMQKSDYINNTFAEGVSPDILECFYDNITYTPFV
HTEEEPGHDKKTLVAQKKTSSFNIRSDKNLIDPYALILEGKLDSIRPSLDDALSQDCPYS
YEAPESRDAFHAVRLAFSNGASLQLTSSRSRPGAFLSQDTTDNPLMADPGVIDIKIAKVG
ILFRKEQKRVLSTARSIWKEWGAILTASQLYLFKETQWIKSILKDLEAGRHVISANDQFH
PTITLSTTGMVALRNSSTSAPPKTSRKVPFVLSAKSLGQEWIAAASETDTAEWTHLINYS
AAFASHSINPNPGTGLNSSLTAALSQDIHTSRRLAMVDALHTLEEKVGAVEIEVDGLLRN
ARHLKLMAPIQQRTRYHVNFCAARLSAKLDWQWLDLTKYQSYRLVLTKELEEEQEWQLTG
GAETAEEADMEETKLEPTQSTTTTLSIASSSSAVLSGFPKMEITTTSSEDDDGDSDESQQ
TNDSFISSLSPSQALSSPSQGVDLSPSQPSIDSAEFEGFEECLPVKSGRNSFLSTTTAIP
RPDSSLSSRSSLQPTVSNGSKQDRFYEVRESILRDTAPSDRSDGDTRSSSLDLPRKASRS
LSLSRSSGDLRSGENSPLKPSMSVRKLRTGLRNGSDSPGREVSPVRADNPSIERSSSLLR
GSDFTLHGKKFSVVEVNPQFAATPHHKRTTSRSERKEEKKGESEP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG