YALI0C07909g

Overview

Description weakly similar to uniprot|G3AUY0 Spathaspora passalidarum SPAPADRAFT_144558 hypothetical protein
Locus type CDS
Locus tag YALI0C07909g

Location

Species Yarrowia lipolytica Positions 1045505..1048287
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 2783 (nuc.)
Previous locus YALI0C07887g Next locus YALI0C07953g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07909g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07909gYALI0C07909g_mRNA-001YALI0C07909g_CDS-001

Nucleotide sequence

 

>YALI0C07909g
ATGAAAATTGAAGAGATCTTCGATGATGAAACGACAACCAAACCCCAGCTAAAACCCGGG
CACACCACAGCACAGGTCAGATCGGACAAGGACATTGAAATGGAGATAGACGACGATATC
CAGAAGAAGGTGCAGAACCTGAAGGTGGAAGATCTGGAGGATCTAGAGAAGACAGCGGTG
CCCACGGCAAAGGAATCGATGGCGCTAGATGCTGTGTTGAAGGACGCAGAAAACCTGGCC
GAAATCGGTGTTGTGGACAACAAGATCAACGTTACAGCAATCTGCCAGTACCAGTTCGGT
CCCGAGGTGGATCCCGACATCAAACGGTACTATTTGACATCTGCCAAGGGGGACGAAGAT
TCGGAGGAGGGTAATTGCCACAAGAAGCGCAAGTCTGTGCCCGACTTCCGTCCATCTGCT
GTGACTATCTTGTTATCAGTACTAAACCTGATCCAGATGAGAGCCAATGCTACAGTCCAC
AACAAGGACATTATTTCCATCAGTTTGAACGACATGAAAACGGTGCACAAGATTCTGAAC
ATGGTGGTTGTTGAGGGTCTATATGGAGGTCTGGACCCTTCTCTACGGTCTGACTTGGAG
AAACGAACACGATTACGTCCTTCTACGACAGAGCAAGACCCGATCTTGGCAGAAATCACA
TACAATGGCATTTCTGAACTCATCAACGACGGTGGAGATGTGGGAGGACTTATTCTAAGA
GCAGGGTACTATGGAGATGTGTTTTTGTTGGCGTCAACGCTCAAGAGGGCTGACTTTATG
GACAAGATTGATACGTACCAGCTGTACAGTATTCTGACTAGATTGGCCAAGAACCATCCG
TTGGTCACTTCTACACTGTCGACTCTTCCCATGCGACCAGATGGAGTCGCTTCTTTCATT
GACTTTGTGCTTACCTCAGGAGATAGCAGTAAGAACCTGCTGATGGAGAAGGTGGTTCAG
GTGCTGACGGCTGTTCCAAAGGGTGTTCCTCCCCGAGACTTCTTCCAGTCCGTCTTTGGG
CAAATTCGACACATTTTGACGTTGGCCTCAGATACGGACTCGTCCAAATTTGTGGTCGAC
TTTGTCGCAAAGTTGTACGACATGCCCAAGTTCCACAAAATCGTGCAGTTTGAGATCAAC
AACCATGTTCTCAATGTGTTTAGACCATCGCGGGAAAAGATTGATTCTGTGGAACTCAAC
CACGTGGTTATTTCTTCCAAACAGCTCGAGCAGGCTCTCGTTACTCTCTACAACCTCCTT
CGAGTGGAACAACCCACGACAGACATCATGGACAAGATCAGCACCAACCTGTGGTACTAT
GCATACTCGGAACACAAACAGAAGTTGCAACCGCGAATGTACCGTTTCCTTGCCGAGTAT
ATCAGCAAGCAGCGACTTGTGACTGTCGATAACACTCTCAGACAGATCTACAACAACCTC
GGACAGACAGGAATCTACCAGACAGACTTTCACGCAGACGGGGACGGTCGATTGGAGCTC
CGGCGAGTCTCAGAGGCTTCTACTTCACCCATGTCTATTCTGTCGGAGGTTGATGATCGG
GTGAGTTTGTTTGTGCGCCTTCTAGGAGAGGCAAAAAACCCTCAGGTGGTGTCTAACATG
TTCACTGAGACTCTGGTGAGATACCTGGAGCATTCTCAGACTGATGATGGAGATCCTATT
GGCCAGCTGATCAATGCGAAGCTCATGGAGGGTTTGATGATGGGTCACAAGGGTCTGATT
GCCAAGAGTCCTGAAAAGATTGTCGAGCTAGTCATCAAGCTGCTAGAGGGGTACGAGAAA
CAGAAGGCTCCAGTCTATGATGATTCAGACGACGATATGGCAGATTCGGATGATGAGATG
GAGGGAGAGGAAAGCATGGTCAAGTCGTCTCTTGACATTCTTTCGGCTTTAGCTCTGGAA
GATGCAAACGTCTCGGACGCCATTCCTGTGGTGGAACAGCTCATGAAGCGAGATCCTTCG
TTACAGCAGACTTGCCAAACATTCCTGGACTCTGTTAAACAGTCTCATATCTCTGAGTTC
TCCATGAAACAGGTTATGGATATGCTTGACGATTCTATGATCCCTATCAGAGCGCAGGGT
CTGCAGAAACTCATCTGGGCCATCAAGAGCAATCACGTAACTCTTGCACAAGTGATGCCT
ATTCTTTTGAAAAACTTGGCTGATGATGACTCGTATATATACCTGAACTGTGTTAAGATG
GTTGAGATTTGCATTGAAAGGTATCCTGATGGATTGGAGACCTTTGCCGGCATTTACACG
GACAAGAAGATGGCTGAAGGAGTGCGTCTCAAGCTGGGAGAAGGATTGGCCAAGGCTATT
GAGCGTCTGGCTGCTGACCGTCGATACGTCAACATTCTGGCTCCCAAACTGTTCCAGATT
ATTCGACCCGATAACCAGTACGAGAACGAAGTGCGCATTTCTGCTCTGTCTCTAATCTCG
ATTCTGTGCGAACGAAACGAGGGTCTCTACACCTCTGAAGGTGATGCTTTTGACGTCGCT
CTGGGTGTGCTTACACATGAGCATGGCGATATTGACGTCAGAAGAGCTGCAGCTAGACTG
TTGGTTACACTCACAATGTATATGAACGGTAATCATTGGGATCAGATCAAAACCCAGGCT
CAACACGTGTATGACAATGATGCCGACGATGTTGTTAAGGGTTACTGCAAGGAGATTCTG
GAGTACATTTCCCATGCCACTGCGAGTTGAATGAATCATGTATATTAGTATAGAATGATA
ATTGTATACATGTTGCCAAAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07909g_CDS-001

Protein length: 910 aa.
Product: Conserved hypothetical protein

>YALI0C07909g_CDS-001 MKIEEIFDDETTTKPQLKPGHTTAQVRSDKDIEMEIDDDIQKKVQNLKVEDLEDLEKTAV
PTAKESMALDAVLKDAENLAEIGVVDNKINVTAICQYQFGPEVDPDIKRYYLTSAKGDED
SEEGNCHKKRKSVPDFRPSAVTILLSVLNLIQMRANATVHNKDIISISLNDMKTVHKILN
MVVVEGLYGGLDPSLRSDLEKRTRLRPSTTEQDPILAEITYNGISELINDGGDVGGLILR
AGYYGDVFLLASTLKRADFMDKIDTYQLYSILTRLAKNHPLVTSTLSTLPMRPDGVASFI
DFVLTSGDSSKNLLMEKVVQVLTAVPKGVPPRDFFQSVFGQIRHILTLASDTDSSKFVVD
FVAKLYDMPKFHKIVQFEINNHVLNVFRPSREKIDSVELNHVVISSKQLEQALVTLYNLL
RVEQPTTDIMDKISTNLWYYAYSEHKQKLQPRMYRFLAEYISKQRLVTVDNTLRQIYNNL
GQTGIYQTDFHADGDGRLELRRVSEASTSPMSILSEVDDRVSLFVRLLGEAKNPQVVSNM
FTETLVRYLEHSQTDDGDPIGQLINAKLMEGLMMGHKGLIAKSPEKIVELVIKLLEGYEK
QKAPVYDDSDDDMADSDDEMEGEESMVKSSLDILSALALEDANVSDAIPVVEQLMKRDPS
LQQTCQTFLDSVKQSHISEFSMKQVMDMLDDSMIPIRAQGLQKLIWAIKSNHVTLAQVMP
ILLKNLADDDSYIYLNCVKMVEICIERYPDGLETFAGIYTDKKMAEGVRLKLGEGLAKAI
ERLAADRRYVNILAPKLFQIIRPDNQYENEVRISALSLISILCERNEGLYTSEGDAFDVA
LGVLTHEHGDIDVRRAAARLLVTLTMYMNGNHWDQIKTQAQHVYDNDADDVVKGYCKEIL
EYISHATAS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG