YALI0C07887g

Overview

Description similar to uniprot|Q03246 Saccharomyces cerevisiae YMR188C MRPS17 Mitochondrial ribosomal protein of the small subunit
Locus type CDS
Locus tag YALI0C07887g

Location

Species Yarrowia lipolytica Positions 1044123..1044891
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 769 (nuc.)
Previous locus YALI0C07865g Next locus YALI0C07909g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07887g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07887gYALI0C07887g_mRNA-001YALI0C07887g_CDS-001

Nucleotide sequence

 

>YALI0C07887g
ATGAGCACAGCATTTTCCCACGCGCGAGGCCGACAGAGCTTTGTCGGCGTGGTGACCCGA
CTCGGTCCTAAGGGCTCCAAGTCCATCAAGGTGCGAGTCACCCGTCGAAAGTACATGCCC
GCCATTCTCAAGGAGATCAACTTCCACCGAGACTTTTACACCCACGACGAGATGATGGCC
TGTCAGGAGGGTGATGTGGTTCGAATCGAGCAGTGCCGACCCATTTCCAAGACCAAGCAC
TTTGCTGTTGCAGAAATCAAATCCGCTCAGGGTCAGGAGTGGCTCGCGTACCAGAAGGCA
GCCCCCGGCCTTGTCGAGGAAGACAACAAGAAGCGAACCATGCAGTTCAACCAGGACAAG
GAGCAGGGAGAGGAGGTCTCAGCTCTGTCTGTGCTGGAGCAGCTGCGACAGGTCGCTGAG
TACGAGTGGAAGGGTCCCCGAGATCAGGCTCACGAGGACCAGGTCAAGCAGATCAAACAG
CACTACGGCATTGATTCGTGGCCCCCGAACAAGCCCATCGCCAACCTCTCTCTGGAGGTG
CTGCGAAACGAGTTTTCCAAGACCCATAGCCTGGTCCAGGCCACCCACATGCTTCAAAAC
GAGCCTGCCAAGGCCGAGGAGATGCTCCAGGAGCTGGGTTTCTCTGGCAAGGGCTTTTCT
CAGAAGCGAAACATCCTTGCCAAGGCCCTGAGACGGTGAGCGGGGATGATAATGACGTTT
TCGGTGAAGACGACCAGAGTTGTAAATAATAAAATGTATATACTGATGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07887g_CDS-001

Protein length: 233 aa.
Product: Mitochondrial ribosomal protein of the small subunit, putative

>YALI0C07887g_CDS-001 MSTAFSHARGRQSFVGVVTRLGPKGSKSIKVRVTRRKYMPAILKEINFHRDFYTHDEMMA
CQEGDVVRIEQCRPISKTKHFAVAEIKSAQGQEWLAYQKAAPGLVEEDNKKRTMQFNQDK
EQGEEVSALSVLEQLRQVAEYEWKGPRDQAHEDQVKQIKQHYGIDSWPPNKPIANLSLEV
LRNEFSKTHSLVQATHMLQNEPAKAEEMLQELGFSGKGFSQKRNILAKALRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG