YALI0C07326g

Overview

Description weakly similar to uniprot|O14249 Schizosaccharomyces pombe Hypothetical protein C6G10.03c in chromosome I
Locus type CDS
Locus tag YALI0C07326g

Location

Species Yarrowia lipolytica Positions 972300..973860
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1561 (nuc.)
Previous locus YALI0C07304g Next locus YALI0C07348g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07326g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07326gYALI0C07326g_mRNA-001YALI0C07326g_CDS-001

Nucleotide sequence

 

>YALI0C07326g
ATGCCGACCGAACAAGTAAACGACACTCCTATCACCCCCGAACGACGGGAGCTCAAGGTA
CCTAACAAGGCCAACCCACTGAGCGTGGCAGAGTCGTTCAAGCAGTACTTTTTTGCCGAC
GGCATCGAAAAGGCAGAGTTCAAGGTGCTGTCCATGCTTCCCTTCTTTCCTGAAACAGAT
GGAAAGCGAAAAGCCAAGGTCTGCGAAACAGAGATCAAAAAGAACACTTACATCAACGAC
TTCCATATCACCAATACCGAGCAGCCGGCTTACGACTCTTCGTCTTCCCGAACACTTGTC
ATGCTGCACGGCTGGGGAACAGGTATGGGTCTGTGGTTTGAAAACCTCGACGTTATCAGT
AGCTTGCCAGGTTGGAATGTCCACGTGCTCGACAACCCTGGAATGGGCCGATCTACGCGA
GAAACGTTCAACATCAGCCAGCATAAGGATGATCCTGATGGACGAAAAATGGTGGCCGAA
ACAGAAGAGTGGTACCTATCCAGACTGGAGGCTTGGCGTGAAAAAAAGGGCCTGGAGCGA
TTCGTGCTACTGGGACACTCTCTCGGAGGATACATTGCTTCTATTTACGCCATGAAGTAC
CCCAACCGCGTCGAGCGACTCATTCTGGTGTCTCCTGTCGGCGTGGAACACATTAATGGT
GTTTCTCTAGATGGATCTATTTCCGATGGCAGTGATGGAGCCGGGGCCGTGAATGGAGCT
GAAAGACCTTCTAGTGCCGGATCATCGTCTACTGCACCCTCAAATGCATCCTCTAAACAA
CCCCTGGGACTCCATGCTGGATCTATGGCTCCTGTTGAGTCTCCTGACACTCCTCAGTCG
CCTGGAGCTACCTCGAACGATTCCAACCTCGGAACTCAACCAACCGGAGAGGACTCTGTC
GTGTCTCAAGAAGAGCCTCATCCTGGAAGAGAGTTTGAAGTCGGTGAGTTTGACGATATC
CCCGATGATATTTTTTCGTCGCTTAAACCCGTCGTGTCTGAGAACCAGATTGACGTCCAT
CTTGGTGCGGACCTCGAGAAGCGACGAGAACAAAACAAGCTGCTGGCATATATGTGGCAG
TCGCATTACTCCTTCATTGGGGCTGTTCGTATTGCTGGACCCATGGGCCCCAAACTGGTG
GCTCGATGGAGTTACATTCGGTTCCAGCAGCTGCCAACCGAGCAACGAGACATTATGCAT
ATATACGCCTACCGTATTTTTGCTGGCAAGGCGTCTGGGGAGCGAGGTCTGACACGTCTC
ATGGCGCCTTTCTGCATTGCTCGACTACCCATCATTGACCGAATCACCAAAATCAAGTGT
CCTTCTTTCTGGATCTACGGCGAAAACGACTGGATGAACACTTCTGCAGGACATGAAGCT
GCCAAGAGGCTCAACAAGCTTGGACGTCCCGCTTACTACAAGATTGTGGCTGAGGCCGGT
CATCACATCTACCTTGATAACATCGATGCCTTCAACAAGAGTGTTGTCAACTATCTCAAG
GATGCTGATGAGGATGGACGTATATAGATAGAGATACAGAGGAATACACAGTCTAGAAAT
A

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07326g_CDS-001

Protein length: 509 aa.
Product: Conserved hypothetical protein

>YALI0C07326g_CDS-001 MPTEQVNDTPITPERRELKVPNKANPLSVAESFKQYFFADGIEKAEFKVLSMLPFFPETD
GKRKAKVCETEIKKNTYINDFHITNTEQPAYDSSSSRTLVMLHGWGTGMGLWFENLDVIS
SLPGWNVHVLDNPGMGRSTRETFNISQHKDDPDGRKMVAETEEWYLSRLEAWREKKGLER
FVLLGHSLGGYIASIYAMKYPNRVERLILVSPVGVEHINGVSLDGSISDGSDGAGAVNGA
ERPSSAGSSSTAPSNASSKQPLGLHAGSMAPVESPDTPQSPGATSNDSNLGTQPTGEDSV
VSQEEPHPGREFEVGEFDDIPDDIFSSLKPVVSENQIDVHLGADLEKRREQNKLLAYMWQ
SHYSFIGAVRIAGPMGPKLVARWSYIRFQQLPTEQRDIMHIYAYRIFAGKASGERGLTRL
MAPFCIARLPIIDRITKIKCPSFWIYGENDWMNTSAGHEAAKRLNKLGRPAYYKIVAEAG
HHIYLDNIDAFNKSVVNYLKDADEDGRI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG