YALI0C07304g

Overview

Description similar to uniprot|P38301 Saccharomyces cerevisiae YBR187W GDT1 GCR1-dependent translation factor
Locus type CDS
Locus tag YALI0C07304g

Location

Species Yarrowia lipolytica Positions 970123..971677
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1555 (nuc.)
Previous locus YALI0C07282g Next locus YALI0C07326g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07304g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07304gYALI0C07304g_mRNA-001YALI0C07304g_CDS-001

Nucleotide sequence

 

>YALI0C07304g
ATGAAACTCTCAACTATCACAACGCTGGTACTGGTGACTCTAGCCGGTGCCACTGCTGCC
AACCTCGAGGAGAACGACCATGCTATGAAAACGGCACCCAAGGACTACGCCGCTCGATAC
GGCTCCGAAGTGGACAAGGGCGACAAGTTTGTGGCCCAGGGACGTCCCGACGTGGAGGAT
CATGAGCGAGAGGACGACGAGGGATCCGAGGCTGCTAAGAACGCCAAAGTCAAAAACACC
AACGGCAAGCCCGCAAAGCCCGCCAAGACTGTAACTGACAAACAGCCCACTGTCATTAAC
GACTACGACCCCAACAACATTGGTCAAAACGAAGCCGAGGTCGATATTGCCAAGGACGCC
GCTGAGCGGGCTAAGGAGGACCGAGTGGCTGCTGTCGTCGGAGTCACCGAGTCTGCCAAC
GATGCCACTGGCTCCAAATCTTCCTCCTCCTCCTCTTCTTCTGGCTCTACCACCACCACC
AAACCCGCTTCTTCAGTCACCGATGTTCCCGTGGATGACGACATGTGGCACACGTTTGTC
ATGGCCTTCTCCATGATCATCACATCCGAGATTGGCGACAAGACCTTCCTACTGGCCGCC
ATCATGGCTTCCAAACATTCGCATTTCACCATTTTCTCGGCCGCCTTCTCATCGCTGGCT
CTGATGACCATCCTGTCGGCTCTAATGGGCCAGGCTTTTCTCCTTTTCGTTTCTCCCCGA
CTCGTTGGCATCGCAGCAGGTGTGCTTTTCCTTGTTTTCGGAATCCGACTGCTGCATGAA
GCCACACACATGGAGGGCGTTTCCATCAAGGACGAAATGGCCGAGGTGGAGTCTGAGATC
GAGGCTTCCGAGATGAACGAAAAGAACCGAGATCTCGAGGCTGGTACCTCTTCCTCCTCG
TCCGGAGATACTACTCTTCGTCGACAAAATTCTGCTCCTGGAATCACCGATGACGGCCTC
GGCGAGCAGGGATACTCGTTCGATATCCGAAAGGCCTCCAAGCCTACCATCAAGCAGTCG
CTAGCCGATATTTCTAACGGGTTTTCCAACCTGGCCAGTCTGGTACTGTCGCCGGCTTGG
GTCCAGATCTTCGTCATGACCTTTCTGGCCGAATGGGGCGACCGGTCGCAGATCAGCACA
ATTGCCATGGGCGCTGGTTCCAACTTCTGGCCTGTGGTTTTCGGCGGAGTGATTGGCCAT
GCTTGTTGCACCTCTGTGGCCATTATTGGAGGCAAGCTGCTTGCCCAGCGGGTGTCCATC
CAGCAGATTACTGTGGTTGGCGCCGTGGCTTTCATCATTTATGCCATTCTTTACTTCTGG
GACATTTACTCCACTTGGCAGTAGATGAGGTAGTAGGACTACCACGATATTTGGGGCTCT
TATAGAAAAATGGATGTTATAGCGTATTCGGAAGAACGTGTATAATTGGGACATACGATT
GGTATCAATATTGAGAAGCTGAGTGAAATATGACCAGATCATCGAATCTGCCCTCCATAC
GGCACCAATACAACCTCCTCAACCAACAATTTGAACAGACTGGTGGTTGACTTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07304g_CDS-001

Protein length: 448 aa.
Product: GCR1-dependent translation factor, putative

>YALI0C07304g_CDS-001 MKLSTITTLVLVTLAGATAANLEENDHAMKTAPKDYAARYGSEVDKGDKFVAQGRPDVED
HEREDDEGSEAAKNAKVKNTNGKPAKPAKTVTDKQPTVINDYDPNNIGQNEAEVDIAKDA
AERAKEDRVAAVVGVTESANDATGSKSSSSSSSSGSTTTTKPASSVTDVPVDDDMWHTFV
MAFSMIITSEIGDKTFLLAAIMASKHSHFTIFSAAFSSLALMTILSALMGQAFLLFVSPR
LVGIAAGVLFLVFGIRLLHEATHMEGVSIKDEMAEVESEIEASEMNEKNRDLEAGTSSSS
SGDTTLRRQNSAPGITDDGLGEQGYSFDIRKASKPTIKQSLADISNGFSNLASLVLSPAW
VQIFVMTFLAEWGDRSQISTIAMGAGSNFWPVVFGGVIGHACCTSVAIIGGKLLAQRVSI
QQITVVGAVAFIIYAILYFWDIYSTWQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG