YALI0C07348g

Overview

Description similar to uniprot|O43000 Schizosaccharomyces pombe Probable transporter LIZ1
Locus type CDS
Locus tag YALI0C07348g

Location

Species Yarrowia lipolytica Positions 973918..975495
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1578 (nuc.)
Previous locus YALI0C07326g Next locus YALI0C07370r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07348g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07348gYALI0C07348g_mRNA-001YALI0C07348g_CDS-001

Nucleotide sequence

 

>YALI0C07348g
ATGAGTGGACGATACGTGCCTCTTGGCAGCAACTACGAAATGACAACGATTGAGGAGAGG
AGCGTTGCCACTTCTTCTGCCGACGAATACAGTCTCAGCGGTCTGAGTGACGATACACAC
CCGTCCAGTGCCAAGATTGACAAGAATGGACACATCACTGAAGTGGCAGAGATTGCTGAA
GTGTCAGATGTGGGTCCGCAGAAGAAGAGGGGCTTCACATGGGCAAAGCTGTTGTGGGAC
TCGGCAGATAAGAGCCCAGCTGAGAAGCGTCTGTTGCTGAAGCTGGACTGGTTTCTGCTG
TCGTCGGTCATGCTCGGATACTTCATCAAGACTCTCAATCAAATGAATATCAACACTGCT
TATATTAACGGTATGAAGGAGGAGTTCCAACTCAATGGAAGTCAACTCAACTACCTCCAG
ACCCTCTGGACGGTTGGATACATTGTTGGACAGATTCCCAGTAACCAGATTCTGCAACGA
ACTAGCGCTAGATACTACTTGGGTTGTCTGGAACTTGTCTGGATGGCTCTCACGTTCCTT
ACCCTCACATGCAACAACATCCACTCTCTATATGCTCTCCGATTCTTTGTGGGCCTCACG
GAAAGTGGATTTTTCCCTGGAGTCGAATACCTACTTGGGTCGTGGTACAACAGAGACGAG
CTCACTAAACGGTCTTCTCTGTTTGCTCTATCTGGAGTAGCTGCGGGTATGGTTACTGGA
TACTTGCAAGCAGCAATTCTTCATGGTCTCGAACACACTTCAATTGCTTCGTGGAAATGG
CTGTTCGTGTTTGATGGTATCATTTCATTCCCTGTTGCTCTCTACACCATGTTGGTGAAT
CCCAATACGCCTGAAACGACCACCAGTTGGTACCTAACTGCCGAAGATGTTGCGATAGCC
AGAGAACGAAGACGAAGAGTGGGCGACTTGGAACACAAAAAGGAACCCATCAGAGACGTT
CTCAAGCGAACCTTTTCCACCTGGCACATCTACGTCTTCCCCTTGGTTTTCCTGTGCTAC
AACAATACCTGTTCGGCCAACTCTCAGCCGACTATGATTTCCTGGCTCAAATCTGAGGGT
TATACACCCACAGAATACAATGTGTACCCCACTGCTGTGGCTGGAGCAGGCATTGGAGTG
ACTCTTATTCTAGCAGTTGTTTCAGACGCGTTCAACGGCCTCAATTGGCCCTTCGTGGCC
GCCTACTTTGCCATTCAGATTGTTGGATCGGCCTTACTGTCCTACTGGAACATCTCCAAT
GGTGCCAAGTGGTTTGCATACTTCGCGGTGGGTGTACCTACGGCTTGGGGACAGCCTATG
ATCTTTTCGTGGCTCAACAGAAGTCTTTACCACGACTACCAGAAACGAAACCTCGTCGTT
AGTATCACCAACACTCTGGCCTATGTGACTGGTGCCTGGGTTCCTATTCTCGTATGGAAC
GCCAAAGATATGCCTCGATACCAGATTGGTTTCACCTATAACGCCTGTTTGGCCGCTGCT
GGTCTGGTTCTTACTGGAATAGCAACTTTCTTGTGGAAGAGAGATGGTCGAAAGGTTTTG
GCAGTTAAGGAGGTGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07348g_CDS-001

Protein length: 526 aa.
Product: Transporter, putative

>YALI0C07348g_CDS-001 MSGRYVPLGSNYEMTTIEERSVATSSADEYSLSGLSDDTHPSSAKIDKNGHITEVAEIAE
VSDVGPQKKRGFTWAKLLWDSADKSPAEKRLLLKLDWFLLSSVMLGYFIKTLNQMNINTA
YINGMKEEFQLNGSQLNYLQTLWTVGYIVGQIPSNQILQRTSARYYLGCLELVWMALTFL
TLTCNNIHSLYALRFFVGLTESGFFPGVEYLLGSWYNRDELTKRSSLFALSGVAAGMVTG
YLQAAILHGLEHTSIASWKWLFVFDGIISFPVALYTMLVNPNTPETTTSWYLTAEDVAIA
RERRRRVGDLEHKKEPIRDVLKRTFSTWHIYVFPLVFLCYNNTCSANSQPTMISWLKSEG
YTPTEYNVYPTAVAGAGIGVTLILAVVSDAFNGLNWPFVAAYFAIQIVGSALLSYWNISN
GAKWFAYFAVGVPTAWGQPMIFSWLNRSLYHDYQKRNLVVSITNTLAYVTGAWVPILVWN
AKDMPRYQIGFTYNACLAAAGLVLTGIATFLWKRDGRKVLAVKEV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG