YALI0C07282g

Overview

Description some similarities with uniprot|F7VT09 Sordaria macrospora hypothetical protein SMAC_05468
Locus type CDS
Locus tag YALI0C07282g

Location

Species Yarrowia lipolytica Positions 967178..967952
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 775 (nuc.)
Previous locus YALI0C07260g Next locus YALI0C07304g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07282g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07282gYALI0C07282g_mRNA-001YALI0C07282g_CDS-001

Nucleotide sequence

 

>YALI0C07282g
ATGAAACCGACCATATACCTTCGGTTTCCGTTCAATCGCAATGGATTTGAGGATCCAGCC
ACTCCAGCCACGGCACTCAGCGATAAACAACTCTCGGACTTCATTTCTAAACTTGTTTCT
CAGGCACCTATAGACTGGCACAAGACGGCTCTGTCTTATCACGTTTCGGTCGTCCACCTG
CTACAGCTGGCGTGCCATTTGTACGACAAAAAGGGCAAGGGATTGAATGATGAGACACAA
AGACGCAACTGGGTGGACAAGCTTGCACACGCGAGTCTTCCTGAGACTCGTGATGTGAAT
GCTGTCAACATGGCGTCCAGAGACCATTCCAATTCAACCACGTCGGCCAACTCACACTCA
AATTCGTCGGTTCCGAGTCTCATCAAGTCACGTGAAAAGAGCCTGGTGATCTCGCCCACA
GATGACGCTGTGTTTGCCAGTGTTGATCATATGAGCAATCCTCATGTGGAGATTAGCCAC
GCGACCAGTGGGACAGCTACGACGAATACTGATCCGCATTTGTTTTCGTCGACAGATCTG
GAGGGAGTTTCTGCGAGTGCATTGGAGGAAGCTATTTTGAGTGCCTTGAACGATTAGGAC
AGGCTTCAAAGCGGTGAGTTTGTTGGACGATAGAAGACAGTGTACCGCAATGGTTGACAC
GATGTAGAGATACAGAGTGGGGTGCAACAAGACAGTTTGATACCATGGATGATTCACGAC
GTTCCAGCAATTGTACATAGTAGTATTTATTAGACAAAATGATACAGGAGTGGTA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0C07282g_CDS-001

Protein length: 199 aa.
Product: Conserved hypothetical protein

>YALI0C07282g_CDS-001 MKPTIYLRFPFNRNGFEDPATPATALSDKQLSDFISKLVSQAPIDWHKTALSYHVSVVHL
LQLACHLYDKKGKGLNDETQRRNWVDKLAHASLPETRDVNAVNMASRDHSNSTTSANSHS
NSSVPSLIKSREKSLVISPTDDAVFASVDHMSNPHVEISHATSGTATTNTDPHLFSSTDL
EGVSASALEEAILSALND*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG