YALI0C07260g

Overview

Description some similarities with uniprot|Q12083 Saccharomyces cerevisiae YPL164C MLH3 Protein involved in DNA mismatch repair and crossing-over during meiotic recombination
Locus type CDS
Locus tag YALI0C07260g

Location

Species Yarrowia lipolytica Positions 964807..966406
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1600 (nuc.)
Previous locus YALI0C07238g Next locus YALI0C07282g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07260g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07260gYALI0C07260g_mRNA-001YALI0C07260g_CDS-001

Nucleotide sequence

 

>YALI0C07260g
ATGATACGAAGAATACCCGATGAAAGCCGAGATATCATAGCAGGATCCATGTATAACCGA
GCCGAGTTTATATGCGGATTACTAAACAACAGCATAACTCGAGGGGCACGTCATGTGACC
ATCTCTGTGCTCCCACAGCTTGGTTTTACGGTACAAGACAATGGGAAGTCAATGACTGAT
ATGCGCCACACACCGGCAGCTCTGGACTTATTGGGGTCTGTTGCTGTGGTGACAGTCGAG
TCACATGACCAGCATCTTACTCTTCAAGGCCATGTGAGAAGCATAAAGATTCGCGATGGC
CCTTCTTCTTCAGAGGGCACGCTCATAACTTGCTCTTCGCTGTTTTACAATATTCCTGTG
AAACGCAAGTATGCTCTTCAACAGAGAGATTATGATCAGGTCATATTTGGCGTTTGGGTA
GAGTTATTGCGGTTTCCAAGCGTTCACGTGACCTTGGTTTCTTCTAATCAGGTCAAGTTG
GAGTTAGTCCCTTCCGATTCGATTGTTGATAGGTGCATGGATATGTTGGAGTACTACAAG
TGTTTTGGCAGGAGGGTTGAGCTGGGAAGGTCACAGGATCAAGAGTTGTTGTTTGGATTG
CCTGAGATGGCTATTACTGGGGCTGTTGGAGCTCGTGGCAATGGTGTCAAAACGGTTCAA
ATTCTTCTTTACAATGGGTCCCCTACTTCTTTGAAGCGGGTTGAGAAGTGTTTGGATCGG
TTCAACTATGTTCTCTTGGTTGATTCATATGCTCAGGAAGGTCTTAGCCAGGAGTTAGTG
GTGCTGGAACTGGTAGAAGAGTGGTTATCGAGCAATGAAAGAGGTCATAAGAGAAGCAAG
AGTGTCGAGTCTGTTTCCAGACCCAGGAAGGCAGTCAGGATGAGAAGTGAGGGTGGGGAT
GTGGCCGACTCGGTTGTAAATATGGACCAGAACACCATAGTTTCTTTCTCTGGTGGGTTT
GAATGTGCTGGTACCTCTAGAGGGGAGTCTTCAACAACTACTAACACAACACTGACTCGC
TTCTCAGAATTCAAAACGATAAGTCAGCTGGAGAAACGGTTCGTTTTGATCCTGGCGCAA
CTGAAGTCTCCCACATTGATCTGCGTGGATCAGCATGCTGCTGATGAACGGATTCTGACA
GACAAGATCACTTCAGATCTGATACGGGATGCCGAAAATGATGTTTCACAAACAGCTGAG
ATTGTGCCTCTGCATCTGTCTCTGAACATGAAACATCTTCTCAAACATCAGACTGTGCTC
AACAAATGGGGCTTTCGTTTCGAAGGAGGCTACTTGAATCATGTTCCTCACTTGGCACGT
GAAATGGATCCTTACCAACTAGACATGGGGATCAAGGAGTACCTAGAAACTCTGGAGAAT
GGAGGTTCAGATAGGGCGGTTCCTGCGTTATTACAGCAACTTGTGGCCTCATTTGCATGC
CGGAACGCTATCAAATTTGGCGATGAACTGACTTTAGAGGAGTGTCACACCATGGTGGAA
AACTTGCTGAAGACGAAACTCCCGTTTCAGTGTGCTCATGGCAGACCTTCCATGGTACCC
TTAGCTCTGATATAAGCAGTATAGATGACTTGGCTTATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07260g_CDS-001

Protein length: 525 aa.
Product: Conserved hypothetical protein

>YALI0C07260g_CDS-001 MIRRIPDESRDIIAGSMYNRAEFICGLLNNSITRGARHVTISVLPQLGFTVQDNGKSMTD
MRHTPAALDLLGSVAVVTVESHDQHLTLQGHVRSIKIRDGPSSSEGTLITCSSLFYNIPV
KRKYALQQRDYDQVIFGVWVELLRFPSVHVTLVSSNQVKLELVPSDSIVDRCMDMLEYYK
CFGRRVELGRSQDQELLFGLPEMAITGAVGARGNGVKTVQILLYNGSPTSLKRVEKCLDR
FNYVLLVDSYAQEGLSQELVVLELVEEWLSSNERGHKRSKSVESVSRPRKAVRMRSEGGD
VADSVVNMDQNTIVSFSGGFECAGTSRGESSTTTNTTLTRFSEFKTISQLEKRFVLILAQ
LKSPTLICVDQHAADERILTDKITSDLIRDAENDVSQTAEIVPLHLSLNMKHLLKHQTVL
NKWGFRFEGGYLNHVPHLAREMDPYQLDMGIKEYLETLENGGSDRAVPALLQQLVASFAC
RNAIKFGDELTLEECHTMVENLLKTKLPFQCAHGRPSMVPLALI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG