YALI0C06820g

Overview

Description highly similar to uniprot|P49626 Saccharomyces cerevisiae YDR012W RPL4B (ohnolog of YBR031W) Protein component of the large (60S) ribosomal subunit
Locus type CDS
Locus tag YALI0C06820g

Location

Species Yarrowia lipolytica Positions 909898..911047
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1150 (nuc.)
Previous locus YALI0C06798g Next locus YALI0C06842g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06820g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06820gYALI0C06820g_mRNA-001YALI0C06820g_CDS-001

Nucleotide sequence

 

>YALI0C06820g
ATGTCCACTCGACCCCAGGTTTCCGTCCACGGCGTTTCCGGCTCTGATGCCGGCGTCACC
ATCGTCCTCCCCGCCGTCTTCAAGGCTCCCATCCGACCCGATATCGTCCACTCCGTCTGG
ACTGGTGTCGCCAAGAACAAGCGACAGGCTTACGCCGTCGCCTCCAACGCCGGTGAGCAG
ACCTCTGCTGAGTCTTGGGGAACTGGTCGAGCCGTTGCTCGAATTCCCCGAGTTGGTGGA
TCCGGTACCCACCGATCCGGTCAGGGTGCTTTCGGTAACATGTGCCGAGGCGGACGAATG
TTCGCTCCTACCAAGACCTGGAGAAAGTGGCACGTCAAGGTGAACCTCAACGAGAAGCGA
TACGCTACTGCCTCTGCCATTGCTGCTTCCGCTGTTGCTCCCCTTGTCCTTGCCCGAGGT
CACCGAGTCGAGACCATTGCTGAGGTCCCCCTCGTTGTCTCCAACGACATTGAGTCCCTC
ACCAAGACCAAGGACGCCGTTGCCGCCCTCAAGGCCGTCGGTGCCCACCGAGACGTTGCC
CGAGTTGTCAAGTCCAAGACCATCCGAGCCGGTAAGGGTAAGCTCCGAAACCGACGATGG
ACCCAGCGACGAGGTCCCCTTGTTGTCTACTCCGAGAACAAGGGTCTCGTTAAGGCCTTC
CGAAACATCCCCGGTGTTGAGACCTGCGATGTGCGACACCTCAACCTGCTCCAGCTCGCT
CCCGGCTCTCACCTTGGCCGATTCGTCATCTGGACCGAGGGTGCCTTCAACCTGCTCGAC
AACATCTGGGGCTCCGAGTCTGTTGCCTCTGCCAAGTCTGGCTACTCTCTGCCCGCCAAC
ATTCTGGCCAACGCTGATGTCTCTCGAATCATTGAGTCTCAGGAGATCCAGTCTATCCTG
AAGCCCGCCAAGGAGATCCAGGAGAAGGACATCCGAAAGATGAACCCTCTCAAGAACAAG
CAGGAGCTGCTCCGACTTAACCCTTACTCCAAGACCTTCGCTGAGAAGAAGCTTGGTTCC
ATCAAGGAGCCCAAGACCAAGGTCAAGAACGCCCAGAAGGCTAAGTTCATGCAGATCCTC
AAGGACAACTAAGAGGTTTGTTATTCAAGCGTCTAGTAAAAATAAAATTCTGTTAACTTA
TACGTCACGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06820g_CDS-001

Protein length: 364 aa.
Product: Ribosomal 60S subunit protein L4, putative

>YALI0C06820g_CDS-001 MSTRPQVSVHGVSGSDAGVTIVLPAVFKAPIRPDIVHSVWTGVAKNKRQAYAVASNAGEQ
TSAESWGTGRAVARIPRVGGSGTHRSGQGAFGNMCRGGRMFAPTKTWRKWHVKVNLNEKR
YATASAIAASAVAPLVLARGHRVETIAEVPLVVSNDIESLTKTKDAVAALKAVGAHRDVA
RVVKSKTIRAGKGKLRNRRWTQRRGPLVVYSENKGLVKAFRNIPGVETCDVRHLNLLQLA
PGSHLGRFVIWTEGAFNLLDNIWGSESVASAKSGYSLPANILANADVSRIIESQEIQSIL
KPAKEIQEKDIRKMNPLKNKQELLRLNPYSKTFAEKKLGSIKEPKTKVKNAQKAKFMQIL
KDN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG