YALI0C06798g

Overview

Description similar to uniprot|P32775 Saccharomyces cerevisiae YEL011w GLC3 1,4-glucan branching enzyme (glycogen branching enzyme)
Locus type CDS
Locus tag YALI0C06798g

Location

Species Yarrowia lipolytica Positions 905521..907758
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2238 (nuc.)
Previous locus YALI0C06776g Next locus YALI0C06820g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06798g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06798gYALI0C06798g_mRNA-001YALI0C06798g_CDS-001

Nucleotide sequence

 

>YALI0C06798g
ATGACACTACAAGTTTGCAAAGACGATCCTTGGCTCAAACCATTCGAGGAGGAACTCCTT
CGACGACAAGCCCTAGTGGGCCAGTGGAAGGACCATTTTGCCAAGGAGGGAGGTCTTGCT
GAGTTTGCAGCCTCCTATAAACGATACGGACTCCATGTCAACAAGGACAACTCGGTCACC
TACAGAGAGTGGGCTCCAGGAGCCTCCGAAGCAGTTCTAACCGGCGACTTCAACGGCTGG
GACAGACAACAGTACCACATGACCAGAGACGAGTATGGACTGTGGAGCGTGACTGTGCCT
CCTACCTCAGATGGTCAGGTGGCAATCCCCCATAACTCCAAGGTCAAGCTTGCTCTGAAG
ACCTCCAACGGTCAATGGGTCGATCGACTGCCTGCCTGGTCCACCTACGTCGTCCAGGAC
CTGTCCAAATCGCCCATCTATGAGGCTGTGTTCTGGAACCCTCCCGAGTCGGAAAAGTAC
CAGTGGAAGAACAAATCTCCCCCCACTCCTGCCAACGCCCAAATCTACGAAGCCCACGTG
GGTATCTCCTCCAGCGAACCTCGAGTCGGCACTTACAAGGAGTTTACAAAGAACATTCTC
CCTCGAATCCACAAACTGGGCTACAACGTGATCCAGCTCATGGCCATCATGGAACACGCC
TACTACGCCTCCTTTGGCTACCAGGTCACCTCCTTCTACGCTATTTCGTCCCGATATGGT
ACTCCAGAGGACCTCAAGGAGCTCATTGACACCGCTCACGGTATGGGTATTACTGTTCTT
CTGGATGTTGTGCACTCTCATGCTTGCAAAAACGTCGATGACGGTCTCAACAACTTTGAT
GGAACTGACCACCAGTACTTCCATGGTGGAGCAAAGGGAGACCATCCTCAGTGGGACTCA
AAGCTGTTTGATTACGGAAAGTACGAGGTTCTTCGGTTCTTGCTGTCCAACCTGCGGTTC
TATATTGAGGAGTACCACTTTGACGGCTTCCGGTTTGACGGAGTCACCTCTATGCTCTAC
AAGCATCATGGTCTCGGTACCGGCTTCTCCGGTGGCTACCATGAGTACTTTGGAGACGAA
CATGTTGATCAGCAGGCCGTTGTTTATCTCATGTTGGCTCACGAGCTCATGAGGGAGCTG
CAACCTCTTCTTCGACCCGGAGAAGATGCAGGCAACTTCCTCTCCATCGCCGAAGATGTG
TCTGGAATGCCTGCTCTCTGTAGACCTGTTTCTGAGGGAGGTGTTGGCTTTGACTACCGT
CTGGCCATGGCTATTCCCGACATGTGGATCAAGCTCGTCAAGGAGACCCGAGACGAGGAC
TGGGACATGGGCAACATTGTTTTTACTTTGACCAACCGTCGTCATCGAGAAAAGACCATT
GCTTATGCTGAGTCTCATGATCAGGCTCTGGTTGGAGACAAAACTCTGGCCTTCTGGCTC
ATGGATAAGGAAATGTACACCTCCATGTCTGTTCTTTCCGACCCCAACCCCATCATTGAC
CGAGGAATCGCTCTCCACAAGATGATTCGACTCATCACCCATTCTCTTGGAGGAGAAGGA
TACCTCAACTTTGAGGGTAACGAGTTTGGACACCCTGAGTGGCTGGACTTCCCTCGAGAG
GGCAATGGCTCCTCTTTCCACTACTGTCGACGACAGTGGCCTGTGGTGGATGACAAGCTG
TTGAGATACCAGCATCTTAATGAATTCGATGCCGCCATGCAGCACCGAGGAGACCACTAC
GGCTGGCTGTCGGCCGACCAGGCTTACGTGTCGTTGAAGAACGAGGACGACAAGGTGGTT
GTGTATGAGCGAGCTGGTCTGGTGTTTGTCTTCAACTTCCACCCCAACAAGTCGTTCACT
GACTACAGAATCGGTGTGGACCAGCCTGGAACATACACCCTTGTGTTGGATTCTGATTCT
CCCGAGTTTGGAGGTTTTGGCCGAATCGACCACGAAAAGACCCGATGCCATACCGAGCCT
CTGGAGTGGAACGGACGGGCTAACTGTATGCATATCTACATTCCTTCTCGAGTGGCTCTG
GTGTTTGCCCGGGAGGATGACCCTAGACGAAAGTAAGTAGTGACAAGCCAACAATGGCGA
AGAGCGTCGCTGGGCTAAAGTCACTACCGCAAGGCATTCAGGATGAAAAGCACTTCTGTT
TTTTATTATTATTTGATTTCGAACATTATATTGTAGACACAAAGCTATTGCCATCATGAA
AGGATTGATGTAAAACCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06798g_CDS-001

Protein length: 692 aa.
Product: Glycogen branching enzyme, involved in glycogen accumulation, putative

>YALI0C06798g_CDS-001 MTLQVCKDDPWLKPFEEELLRRQALVGQWKDHFAKEGGLAEFAASYKRYGLHVNKDNSVT
YREWAPGASEAVLTGDFNGWDRQQYHMTRDEYGLWSVTVPPTSDGQVAIPHNSKVKLALK
TSNGQWVDRLPAWSTYVVQDLSKSPIYEAVFWNPPESEKYQWKNKSPPTPANAQIYEAHV
GISSSEPRVGTYKEFTKNILPRIHKLGYNVIQLMAIMEHAYYASFGYQVTSFYAISSRYG
TPEDLKELIDTAHGMGITVLLDVVHSHACKNVDDGLNNFDGTDHQYFHGGAKGDHPQWDS
KLFDYGKYEVLRFLLSNLRFYIEEYHFDGFRFDGVTSMLYKHHGLGTGFSGGYHEYFGDE
HVDQQAVVYLMLAHELMRELQPLLRPGEDAGNFLSIAEDVSGMPALCRPVSEGGVGFDYR
LAMAIPDMWIKLVKETRDEDWDMGNIVFTLTNRRHREKTIAYAESHDQALVGDKTLAFWL
MDKEMYTSMSVLSDPNPIIDRGIALHKMIRLITHSLGGEGYLNFEGNEFGHPEWLDFPRE
GNGSSFHYCRRQWPVVDDKLLRYQHLNEFDAAMQHRGDHYGWLSADQAYVSLKNEDDKVV
VYERAGLVFVFNFHPNKSFTDYRIGVDQPGTYTLVLDSDSPEFGGFGRIDHEKTRCHTEP
LEWNGRANCMHIYIPSRVALVFAREDDPRRK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG