YALI0C06622g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0C06622g

Location

Species Yarrowia lipolytica Positions 889862..891198
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1337 (nuc.)
Previous locus YALI0C06600g Next locus YALI0C06644g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06622g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06622gYALI0C06622g_mRNA-001YALI0C06622g_CDS-001

Nucleotide sequence

 

>YALI0C06622g
ATGCCCCGATTTCTGCGCAAATTCCGACGCACGCGCCCGGTATCTACCGAGCTGGCGCCG
CTCGAAACGCTGCCCGTCGAAATCGTCGAAAAAATTCTCCTCTATCTCCAACAAGACTGC
CAGGCCGCGGTGGAGAAACAGGGCTACACCGACCATGAACTCACCATTCGCAGCAAAAAC
CTGTACTTGCGGTCGCTCATCAACCTCGCCAAGTGCTCGAAAACGCTCCAGACTGATCTG
CTGGCCCCAGTCATCTACAGACAGGTGCTTTTGACCTGTAAGACCCAGGTGGAGAGGTTC
TACAAGGCCCTGTCAAAGGGATACATTAGACAAGAGATTGTGGCTGCTGTGGAGATTGTC
ATATTCGAAGAAGTCACCAATGACAACCCCCAACAGGTCTCTATCGCATCGTACTCCTAC
AACACAGACACCAACCAAAAGACATACCAAGAACTTATTGTGGCTATCGTCAAAAAACTG
CCCTCTCTACAAGAGGTACGAATCATTAACATGGCCCCAAAGTTCCAATTCCGAAGCTCA
AAACCGTCGCTCCATGTCAAAAGCCTCACTGTGTCTACGGAACCAGGCTGGAGAGTCTAC
ATCCAACCAGACATTCTCGAGCAGTTCCCAAATATCGATACCCTCAATCTACAAGACATT
GTCATTGATGGAAACTCCCTGTCTCGAAAATATGCCAATGGCAACACATCCCCGGCACAG
GGATCGCCGTTGACGCCAACCAAGTCCCAAAATAGAGCCTCCTCGTACTTCTCCTTCAGA
CCCTCGTCTCCTAAACCTCCAAAGGAAGACAATGAGACGAGAACATCTCCTCTGGGCATC
ACTACCCTCCAACTCACAGACTGCATCATTCACCCCACTGCAGTACCAGAGATCCCACGG
TTCTTCGATAACTTGCACACATTGACCCTCAAGGTAAAGGCAAAGACTCAGATCAAACTG
CTGGCGGTCGCTCCCCTATTCCCTACCCTCACAGACTTGACTGTAGACATCCAACCAAGC
AGCCAAACAGACTTGCTGCCATTCCTGGAGAAGTACAACTTGGAAGCATTGCCCAAGCTG
CAAAAACTGACGCTAGTCGGTATCACCCCGACCCTGTTGACGCACGCACAGTTCGTAGCT
GCCGCGGAAAAGATGGCCATCAATGAAATGGACTGCCACTTTCTCCAACGACCAGCTTCC
ACTTTCGCACAAGATATCAAACTGTCCCTATCCCCTACTCTCTACTACAAGAACCAGAGA
CTCGACTTGTAATACTGCACCGGTACACCGATCTATTTATTTTTACCATAATAATATTAA
TGTATTTATTGTTAGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06622g_CDS-001

Protein length: 424 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0C06622g_CDS-001 MPRFLRKFRRTRPVSTELAPLETLPVEIVEKILLYLQQDCQAAVEKQGYTDHELTIRSKN
LYLRSLINLAKCSKTLQTDLLAPVIYRQVLLTCKTQVERFYKALSKGYIRQEIVAAVEIV
IFEEVTNDNPQQVSIASYSYNTDTNQKTYQELIVAIVKKLPSLQEVRIINMAPKFQFRSS
KPSLHVKSLTVSTEPGWRVYIQPDILEQFPNIDTLNLQDIVIDGNSLSRKYANGNTSPAQ
GSPLTPTKSQNRASSYFSFRPSSPKPPKEDNETRTSPLGITTLQLTDCIIHPTAVPEIPR
FFDNLHTLTLKVKAKTQIKLLAVAPLFPTLTDLTVDIQPSSQTDLLPFLEKYNLEALPKL
QKLTLVGITPTLLTHAQFVAAAEKMAINEMDCHFLQRPASTFAQDIKLSLSPTLYYKNQR
LDL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG