YALI0C06600g

Overview

Description weakly similar to uniprot|P38162 Saccharomyces cerevisiae YBL107c hypothetical protein
Locus type CDS
Locus tag YALI0C06600g

Location

Species Yarrowia lipolytica Positions 888094..888734
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 641 (nuc.)
Previous locus YALI0C06578g Next locus YALI0C06622g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06600g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06600gYALI0C06600g_mRNA-001YALI0C06600g_CDS-001

Nucleotide sequence

 

>YALI0C06600g
ATGTCTTCCTGGACCCCGCCCAAGCCCGGTCTGACAGCAGCTAATTGCATCGAAGCCCGT
GCCCTGCGCCAGTTTCTCCGGGCAAGTCGCAAAACTGTGGACGACCGAGTTCTGGTGACC
ATTTCAAAACTGGGCAATGACACCGCCGCAGAGCAAATCAAACATAACTCTGGATACACT
GGCTACAAACCCGCGTGTAACGAGTTTGTACAGGAGGTGCTGCTACCCGCATGGAACGAG
CGAGACCGAGTTCTCACTTACTGTGGCGATGTGGCCCGTCTAGCCAAGGACAAGAAGGGA
GGAGATATGACTGAAGCTGCTCAGACTCAGGACGAAAACGAAAAGCCTGCTAAACGACAG
CCGCTTGATCCCTACGCCGCCGAGGCTCGAACCAACCAGAAATCGGACGCTGATCGAGTG
CTTGATTGGGTTGAAACCGAACGAACCATCGAGGGCATTGTCAGAGACACCACTCGAGCT
GAGGTCTACGACAAGTGCGGAATCTCTCTGCAGTAGGTCCTGAACGACCGCATAGACCGT
GTACATAGTTAACAGCCGCTAGGCGTGCATCCAGATGAGCTGTGGTCAATTATACTGTAC
AGTGTATAACTACAGCAGCTAATACAAACACGAGCGAACAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06600g_CDS-001

Protein length: 172 aa.
Product: Conserved hypothetical protein

>YALI0C06600g_CDS-001 MSSWTPPKPGLTAANCIEARALRQFLRASRKTVDDRVLVTISKLGNDTAAEQIKHNSGYT
GYKPACNEFVQEVLLPAWNERDRVLTYCGDVARLAKDKKGGDMTEAAQTQDENEKPAKRQ
PLDPYAAEARTNQKSDADRVLDWVETERTIEGIVRDTTRAEVYDKCGISLQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG