YALI0C06644g

Overview

Description similar to uniprot|C5M223 Candida tropicalis glycolipid-anchored surface protein 4 precursor
Locus type CDS
Locus tag YALI0C06644g

Location

Species Yarrowia lipolytica Positions 891223..893422
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2200 (nuc.)
Previous locus YALI0C06622g Next locus YALI0C06655r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06644g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06644gYALI0C06644g_mRNA-001YALI0C06644g_CDS-001

Nucleotide sequence

 

>YALI0C06644g
TGCCTAAGACGCTTCAGCCTAATTACACTACAAGTACAAGTACAAGTACAGTACAGTACA
GTACATACTTCATTGCTCCCATACCCCAATTAAGGCGGCGGCCATAACACCGTCTCCGTG
GTAACGTGAAAACGCTTTTGTGACCATATCTAAAAAGACATGGCCTAATTCTCAGCTACT
CACAACCTGCCTCTCTTCATCCACCACACCCTATCAAGCAACACACTGAAGAAACATGAG
GACCGTCCTGCGACTTTTCGGACTGGCGGCCACAGTTCTGGCCGGAATTGCTCCTATCGA
GTGGGAAGGCAGCACTTCCGCGACTCGGTCACCAAAGAACCGGTATGATACCTTCCTCCT
TGACACCCCCCCTTTTGATTCCACCCTCAACACATCAGAGCTTGTGATACCAGTTTGTGT
TACTAACGCAGTTCTTCTTCAAGGGCATAGACTACCAGCCCGGCGGGTCGTCGGCGTTTG
TGGGCCGATCGGACCCGCTGTCAGACTACGAGGCATGTTCCAGAGATATTTACCTGTTTC
AGCAGCTCGGAGTCAATGTGAGTATAATCCACTCTTAACAGTGACTTGCACCCCTCAGCT
AACATAGGCAATCCGCGTCTACACAGTCAACCCAGACATCAACCACGACGAATGCATGAC
CCTGCTGGCAGAAGCAGGCATCTACCTCATTCTCGACGTCAACTCCCCACGCATTGGCGA
GTCGCTAAACCGATACGAGCCCTGGACCACCTACCATGAAAAGTACCTGGAGCACATCTT
CAAGGTTGTCGAGCAGTTCTCCCATTACAACAACACTCTGGCTTTCTTTGCCGGCAACGA
GGTCGTCAACGATGACCAGTCCGCCATGGTGTCGCCCAACTACATCAAGGCTGTAGTGAG
AGACCTCAAGTACTACCTAGCCAACCAGTCGCCCCGAAAGATTCCCGTCGGATACTCTGC
CGCAGACGATCTCAAGTACAGAACCTCGTTGGCACAATACCTCGAGTGTGGTGACGAGAT
GTCTTCCGTCGACTTTTACGGAGTCAACTCCTATCAGTGGTGTGGCGAACAGTCTTTCGT
GTCTTCCGGATACGACAGACTCGTGGACGACTACAGGGACTACTCGCTGCCGCTCATCTT
CTCCGAGTACGGATGCAACGAAGTCAAGCCCCGTACTTTCCAGGAGGTCCGAGCAGTTTA
CTCAAGCAGCATGACTGACGTATTTTCTGGAGGGCTCATTTACGAGTTCTCCCAGGAGCC
CAACGACTATGGTCTTGTCCAGATCTACAAGAACCACTCCGCGCAGGTTCTGGAGGACTT
TGAGGCACTCAAGAAAGCATACCACGACGCCCCCAAGGCCAAGCTGTCAGACTTCCGAGC
TGTGGAGCGACCTCAGAGGTGCGAGCTCGTGTATCCCAACATCAACACCATGAACCCTCT
CCCCGACACGTTTGGTCTGGACATGATAACTCGTGGCGTGCGGGCACCCAGGGGCAAGTA
TGTTGACTTGCACAAGCGGGGTACATCGTACACCATCTACGACCTGGAAGGAAATGTGAT
CGAGGACACTGAGGTGCAGCAGGTGATTGATCTGAAGGAGCCTCTTGCGGCACCGCCCCC
ATCGCCCCCCACACGGAAGGCCCCCGCTGTCCCAGAGCCAAAGGACCCTGTGGAGCCAGT
CTACGATGAGTATCCGAAGAAAGTCGCTACCGTTGAAGAGGAGGATGATCACGAGGTGGT
GAACCCACGGAGACCATTTGAGAGAAAGAGTGAGTGTGATAGTTGCGGTACCGACATCGA
CGGTGATGGCTGGAGCCGAGATTTCTTTTCATCCTTTAATTATGCTAACTTACTAGAGAC
AAGCACCGGGTCATACAGAGACACGGCAGTGCTGGGGTGGATCAAGTACCTGGTGTCAGT
GATGCTTGGCGTGGTGGTGGTGGAAGTGGTGCGGCTGATGTAGGTCGAGGAGGTTTTGGT
GTTTGGTCTGTGCGTAAGCCTGGCACTCCTGCTGGCCGACGGCAACGTTTTCGAAGTCAG
AACAAGCCGGCTCCACTCTCACAGAGGGAGCTCAAGCACCGAGTCTATGCACTGTCCAAC
CTTGGTGCGTTCCCTCGGCGTGCACGACGACCTCTTGGGGGCGTGAGGCTTGCGCGGAAC
CAACAAAATCAGCTTGTGATTATTTTATAAGAGAATTCGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06644g_CDS-001

Protein length: 407 aa.
Product: Glycolipid-anchored surface protein 4 precursor, putative

>YALI0C06644g_CDS-001 MTLLAEAGIYLILDVNSPRIGESLNRYEPWTTYHEKYLEHIFKVVEQFSHYNNTLAFFAG
NEVVNDDQSAMVSPNYIKAVVRDLKYYLANQSPRKIPVGYSAADDLKYRTSLAQYLECGD
EMSSVDFYGVNSYQWCGEQSFVSSGYDRLVDDYRDYSLPLIFSEYGCNEVKPRTFQEVRA
VYSSSMTDVFSGGLIYEFSQEPNDYGLVQIYKNHSAQVLEDFEALKKAYHDAPKAKLSDF
RAVERPQRCELVYPNINTMNPLPDTFGLDMITRGVRAPRGKYVDLHKRGTSYTIYDLEGN
VIEDTEVQQVIDLKEPLAAPPPSPPTRKAPAVPEPKDPVEPVYDEYPKKVATVEEEDDHE
VVNPRRPFERKKTSTGSYRDTAVLGWIKYLVSVMLGVVVVEVVRLM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG