YALI0C06083g - HEM1

Overview

Description uniprot|Q6CCW0 Yarrowia lipolytica YALI0C06083g HEM1 5-aminolevulinic acid synthase
Locus type CDS
Gene name HEM1
Locus tag YALI0C06083g

Location

Species Yarrowia lipolytica Positions 782180..784058
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1879 (nuc.)
Previous locus YALI0C06061g Next locus YALI0C06105g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06083g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06083gYALI0C06083g_mRNA-001YALI0C06083g_CDS-001

Nucleotide sequence

 

>YALI0C06083g
ATGGAATCTCTCGTTCGACAGTCCAAAAAGCTCTGCCCCTACATTGGTCGAACCTCGGCT
TCCAGCCTCAAGCAGCTCGGAAACGGGCGACTGACCCAGAAGGCAGGCCAATGCCCCATC
ATGGGCAAGGCCATGGGAGTGCGTGGCTTCAAGTCCGACGCCGGATCCAACGCCGAGTCC
GCCACCGTTGACGTCCATGCCGCCGTGGACACCTCCAAGGGCACCTGCCCCCACGCGGCC
CAGTACTCGCCCGTCTACCCTTCGTCTCGGCTCGACAACTACCCGTTCGGAATGACCCAG
CGAGGCCTCGGAAAGGTGCCCACCCAGGACGCCCACAATGCCACCACCTTCAACTACGAG
TCCTTCTACGAGAACAAAATCAACGCCAAGCACCAGGACAAGTCATACCGGTACTTCAAC
AACATCAACCGACTGGCCGCCGAGTTCCCCCGAGCCCACAGAGGCTCCATTGAGGAGGAC
AAGGTGACCGTCTGGTGCGCAAACGACTACCTCGGCATGGGCCGAAACCCCGTCGTCGTC
GACGCCATGCACGAGACTCTGGACAAGTACGGAGCCGGCGCTGGTGGAACCCGGAACATT
GCTGGCCACAACCGACATGCCGTCGAGCTCGAGGCCGCTATCGCCGACCTCCACAAGAAG
GAGGCTGCTCTGGTCTTCTCCTCGTGCTACGTCGCCAACGACTCCACCCTGTCGTTGCTC
GGCCAGGCTCTCCCCAACTGCGTCTACTTCTCCGACGCTTCTAACCACGCCTCCATGATC
CACGGAATCCGACACGGAGGGTCCGAGAAGGTTGTGTGGAAGCACAACGACCTCGCTGAT
CTGGAAGCCAAGCTCGCTCGATACCCCAAGAGCACTCCCAAGGTGATTGCATTTGAGTCC
GTCTACTCCATGTGTGGTTCCATTGGCCCTATTGAGGAGATTTGTGACCTGGCCGACAAG
TACGGCGCCATCACGTTCCTCGACGAGGTCCACGCCGTTGGTATGTACGGCCCCACCGGT
GCCGGTGTTGCCGAGCACCTCGACTTTGAGCACTACCACTCTGGTGCTCAGACCCAGCGA
CAGCCCATCATGGACCGAGTGGATATCTTCACCGGAACCCTCGGAAAGGCTTACGGATGT
GTTGGTGGCTACATTGCTGGCTCTGCCAAGTTTGTTGACATGGTTCGATCTTATGCTCCC
GGTTTCATCTTCACCACCACTCTTCCCCCTGCCACCATGGCCGGTGCTCGAGCTGCTATC
AACTACCAGAAGGCTACCATGAAGGACCGAGTTGCCCAGCAGACTCACACTCGATACGTC
AAGGACAAGCTGGCCAACCGAGGAATTCCCGTTGTTCCTAACCCCTCTCACATCGTGCCT
GTTCTTGTTGGTGACGCCCAGAAGGCAAAGGCCGCCTCCGATCTTCTGCTGACCAAGCAC
CAGATCTATGTGCAGGCTATCAACTTCCCCACTGTTCCTATTGGCCAGGAGCGACTGCGT
GTGACCCCCACCCCCGGTCACCATGAGGGACTCTGTGACGAGCTGGTTGCTGCCCTGGAA
GACGTGTGGCAGGAGCTTGATCTTAAGCGAGTTGAGGACTGGACTGCCGAGGGCGGTCTG
TGTGGCGTTGGCGAGGGTGTTGAGGTTGAGCCTCTGTGGAGCGAGGAGCAGCTGTCTTAC
GGACGAGACTAAGTCTGTGCTCGCTTCATGAACAATGAGAGTGTGTGCTTTGACTAGTTT
CGCACTCTCACTTTACTTCACACACCCAAAGTGCACTTCAAATTAGTGCGGTGCACTCGA
ACTCCCCACAAAATCAACTCTTCAAAAACAAAACATGTAATTGTAAAGCATTTGGCTGGA
CGCCAGTGGTTTAGAACCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06083g_CDS-001

Protein length: 564 aa.
Product: 5-aminolevulinic acid synthase
Gene: HEM1

>YALI0C06083g_CDS-001 MESLVRQSKKLCPYIGRTSASSLKQLGNGRLTQKAGQCPIMGKAMGVRGFKSDAGSNAES
ATVDVHAAVDTSKGTCPHAAQYSPVYPSSRLDNYPFGMTQRGLGKVPTQDAHNATTFNYE
SFYENKINAKHQDKSYRYFNNINRLAAEFPRAHRGSIEEDKVTVWCANDYLGMGRNPVVV
DAMHETLDKYGAGAGGTRNIAGHNRHAVELEAAIADLHKKEAALVFSSCYVANDSTLSLL
GQALPNCVYFSDASNHASMIHGIRHGGSEKVVWKHNDLADLEAKLARYPKSTPKVIAFES
VYSMCGSIGPIEEICDLADKYGAITFLDEVHAVGMYGPTGAGVAEHLDFEHYHSGAQTQR
QPIMDRVDIFTGTLGKAYGCVGGYIAGSAKFVDMVRSYAPGFIFTTTLPPATMAGARAAI
NYQKATMKDRVAQQTHTRYVKDKLANRGIPVVPNPSHIVPVLVGDAQKAKAASDLLLTKH
QIYVQAINFPTVPIGQERLRVTPTPGHHEGLCDELVAALEDVWQELDLKRVEDWTAEGGL
CGVGEGVEVEPLWSEEQLSYGRD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG