YALI0C06105g

Overview

Description weakly similar to uniprot|O74395 Schizosccharomyces pombe MFS efflux transporter of unknown specificity
Locus type CDS
Locus tag YALI0C06105g

Location

Species Yarrowia lipolytica Positions 789911..791800
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1890 (nuc.)
Previous locus YALI0C06083g Next locus YALI0C06127g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06105g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06105gYALI0C06105g_mRNA-001YALI0C06105g_CDS-001

Nucleotide sequence

 

>YALI0C06105g
ATGGCATTTGCAGTAGAGGACAAGTACAAGTCGCTGTGCCAAAAGCTCTTCTTCTCTCGA
GTCCCTGTTAAACACTACCCTCGAAAGCACTGCAACACCAACGCCAAGGAACGAGGATGG
ACCACCACCACCGTCATTGTCGGCTGGATCTTCATCTACCTCTACGCCTCAGGTAAGACT
ATTGCCCAGCATCTGTTCCCTTCCCTCGCCCCCTTTGCTACCTCCCACTTTTCCGGCCTG
GCTCTTCTGTCGTCTCAGGCCGTTGTTGAATCAGCCATTTTCGTTGTTGCCCGACCCGCA
TGCGCCAAGATCTCCGATCATTTGGGCCGACTGGAGGCCTGGATCGTTGTTGTTGTGGCC
CACATTATTGGAGCCGTTCTCTACGCCGCCTCGCCTAACATTGGATGCTACTTTGCAGGC
ACAGTCTTCTGGGAAATCGGAATGGTCGGAGGCCATCTGATGATGGAGCTGTATGCCGCT
GATACCTCAACCACCGAGACCCGAGTGTTAGCCTCCTACTTCATCCAATCTCCCTCTGTG
TGGGCTCCATGGATCTCAGCCCCTGTGGTTGCCGGCTTCCTCAAGGTCACCACCTGGCGA
TGGGGCTACGGATCCATGGCCATTATCATCCCCGGAACTTCTATCGGTATTATTATCACC
CTGCTCTACATGCGACTGAAGTACGAGAACAGACTCGGAGGCCAAGGAGACTTCTACAGC
CCCGGAGGTCCCATGCGATTCATCAAGTCTTTCGATATCATTGGTCTGCTGGCGGTTGGA
GGTGCCATGATCCTCTTTTTCCTGCCCATTACCTTTGCTGCCGGAACTGACAAGTGGAAG
TACCACTCGTACATTGCCATGCTCACCATTGGTTCTTTCCTCATGGTGTTCACACCCATC
TGGGAGGTGTACGGAACAAAGACCCCTCTGATCCCCTGGAAGCTGTTCAAGTCGCGAATC
ATGGTCATCTCCTCAGCCCAGATGTTCCTGCTCTCCATGGCCAACAAGATCTACATCCCC
TACTTCATCACCTGGCTGCTGGTGGTCAAGGGCCAGTCTCCCAAGGCCGCTACCAACGTC
TCCTCCACTCTGATTGTCACCGCCAACGCCTGGGGTCTGTTTGCCGTTGCTCCCTACATG
TGGTGGAGAGGCCACTGCAAGCGAGTCATTGTCATCGGTACCTGTCTGCATCTGGTCGGT
ATCGGTATGACCTACCACTACCGAACTCCCCACGGATCGCTGGCGGTCATGATCATCGCC
CAGGTCTTTGAGGGTGTGGGACGAGGTATGATCTACATTCCCGCTGTCGCCATGGCTCAG
GCAGTCTTCGACAAGCACAAGGTGGCCTCTGTCACCGCTCTGTACTACACCACTGGTGGT
GTTGGACAGGTTATTGGTGACTCCATCTCCGGTGCCATCTACCGAACCCTCTACCCCAAG
TACATTCACAAGTACGCCCCCGATATCCCCGCCAAGGACCTCAACATGATCATCAACAAG
ATCAAGAAGGCCACCAAGTACCCCATGGGCTCCAAGGTCCGAACTGAGATCAACATGGCC
TTCAACGAGGCTATGCGACACATGCTTCTCGGTCCCTTTGGATGCGTGGCCGGCATGATT
GTTCTTTCTCTCTTCTACCCCATGGTCAACCTCAAGGAGGCCTCTGACGACGTCTACGAT
GCTCCCGACAACTCCGACGGAGAGGACATCTTCACTCCTCACCCTGCTCCTGGCACCGAG
GGCGATCTCGAGAAGCAGCACTCCGGAGACGAGAAGTTCGAGAGTAACTCCGAGAACGGC
GAGCACACCAACTCTGAGGAGGGCAACCTGCCTCGAGTCTCCGCTGAGGCTGCTGCGGCC
TCTTACATTAATAACACCCAGGTTTTGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06105g_CDS-001

Protein length: 630 aa.
Product: Conserved hypothetical protein

>YALI0C06105g_CDS-001 MAFAVEDKYKSLCQKLFFSRVPVKHYPRKHCNTNAKERGWTTTTVIVGWIFIYLYASGKT
IAQHLFPSLAPFATSHFSGLALLSSQAVVESAIFVVARPACAKISDHLGRLEAWIVVVVA
HIIGAVLYAASPNIGCYFAGTVFWEIGMVGGHLMMELYAADTSTTETRVLASYFIQSPSV
WAPWISAPVVAGFLKVTTWRWGYGSMAIIIPGTSIGIIITLLYMRLKYENRLGGQGDFYS
PGGPMRFIKSFDIIGLLAVGGAMILFFLPITFAAGTDKWKYHSYIAMLTIGSFLMVFTPI
WEVYGTKTPLIPWKLFKSRIMVISSAQMFLLSMANKIYIPYFITWLLVVKGQSPKAATNV
SSTLIVTANAWGLFAVAPYMWWRGHCKRVIVIGTCLHLVGIGMTYHYRTPHGSLAVMIIA
QVFEGVGRGMIYIPAVAMAQAVFDKHKVASVTALYYTTGGVGQVIGDSISGAIYRTLYPK
YIHKYAPDIPAKDLNMIINKIKKATKYPMGSKVRTEINMAFNEAMRHMLLGPFGCVAGMI
VLSLFYPMVNLKEASDDVYDAPDNSDGEDIFTPHPAPGTEGDLEKQHSGDEKFESNSENG
EHTNSEEGNLPRVSAEAAAASYINNTQVL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG