YALI0C05709g

Overview

Description weakly similar to uniprot|P18544 Saccharomyces cerevisiae YOL140w ARG8 acetylornithine aminotransferase, hypothetical
Locus type CDS
Locus tag YALI0C05709g

Location

Species Yarrowia lipolytica Positions 736466..738083
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1618 (nuc.)
Previous locus YALI0C05687g Next locus YALI0C05731g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05709g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05709gYALI0C05709g_mRNA-001YALI0C05709g_CDS-001

Nucleotide sequence

 

>YALI0C05709g
TGTGAGTATCTACGTTGATCTGTAGTGACAGGCGACTAGTACGTGTCCCTGGCTTGGATC
ATGTGGGGTTATCAACCCGTATGTCTCCATGGGTCTGAGCCACCTGACTTGTCTGGAACA
ACAGGTGGTTGCAACACCGACATATGGACTGCGTTTGTGTGTCACAGAACCAGTTGAGCC
CATGCTGTTGCCAAAAGCTGATGACTACCCCACCTCGATTGCTAACACAGATTCACCTAT
TGCACCCCTCACCATGTCCATCTTCCAGAACGCCGTGAATGCGGACCTCCCCCGAGCCAT
CGCTGGCAAAGGCTCCTACCTGACACTGGAAAACCCCAAGACCGGCGCCCAATACGACAT
CCTCGATGGCTCCTCCGGGGCTGCCGTCGCCGCCGTGGGCCACAACCACCCCCGAATCGT
GCAGGCCATGCAGCACTGTGCTGGTCTGCCCTACATCTTCACGCATGCCGTGGGCTCCAA
GCAGGCCGACGATCTCGCCGAGCTCATTCTATCCAAGTCCAACGGGGCCTTTTCGCGGGC
CCTGTTTCTCAACTCCGGGTCGGAGGCCAACGAGACCGCCATGAAGATTGCCACCCAGTT
CTTCTACGAGCAGGGCCAAACCCAGCGATGCAACTTCATCTCCCGTGACTTCTCCTACCA
CGGCAACACCCTTGGCTCTCTTTCCCTCGGCGGCTTCAAGTCCCGACAGGTGCCCTACAA
AGAGATTCTCAACTCCAAGGCCTTCCACAAGGTCTCCACATGCTTCCCCTACCGGCACCA
GAAGGACGGCCAGACCGAGGAGCAGTACACCCAAATGCTGCTGGACGAGCTGGACGCCAA
GTTCCAGGAGCTGGGCCCCGACACGGTCATTGCCTTTGTGTGCGAGACTGTGATTGGCGC
CACTCTCGGTGCCGTGCCCCCTTCCAAGGGCTACATTTCCGGCTGCCGAGACATTTGCCA
CAAGTACGGCGCTCTGTTCCTTCTGGACGAGGTCATGTGTGGCATGGGTCGAACCGGTAC
CTACCACGCCTGGGAGCCCGAGTTTGAGGCCGGCACTGGCGGCCCCGACATTCAGACCGT
GGCAAAGGTACTAGGAGGTGGCTACGTTCCTCTCGCAGGAGTCCTGCTTTCCCCCAAGGT
CTTTGACGTTTTCCAGAAGGGCTCGGGCATTGTCTACGGCCACCAGACCTACCAGGACCA
CGTGTTTGCCACTGGCGTGGCTCTGGAGATCCAGCGGCTTATTTTCGACCAGAATCTCAT
TGAGGAGTGCTTCGAGATGGGCAAGTATCTGGGCATGGCTCTCAAGCGCAAGTTTGCAGA
CAACCCTTATGTCGGAGACGTGCGGGGCCGGGGTCTGTTCTGGGACGTTGAGTTTGTGGC
GGACAAGGCGACCAAGGAGGTGTTTCCGGCCTCCATGAACCTGGCTGGCATCATGCATGT
TCGGTGCATTGAGAACGGCGCCCATTTCCTCAAGGGCAAGGGCACCATTGATTCTGTTCT
CGGAGACCACATGATGGTGTCTCCCGCGTACACCGTCACCCGGGTGGAGATAGACCGTAT
GATCGACGTGTTGGCCAACACTCTGGCCGAGGTTCTTGCTGAGAATGGGTACAATTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05709g_CDS-001

Protein length: 455 aa.
Product: Conserved hypothetical protein

>YALI0C05709g_CDS-001 MSIFQNAVNADLPRAIAGKGSYLTLENPKTGAQYDILDGSSGAAVAAVGHNHPRIVQAMQ
HCAGLPYIFTHAVGSKQADDLAELILSKSNGAFSRALFLNSGSEANETAMKIATQFFYEQ
GQTQRCNFISRDFSYHGNTLGSLSLGGFKSRQVPYKEILNSKAFHKVSTCFPYRHQKDGQ
TEEQYTQMLLDELDAKFQELGPDTVIAFVCETVIGATLGAVPPSKGYISGCRDICHKYGA
LFLLDEVMCGMGRTGTYHAWEPEFEAGTGGPDIQTVAKVLGGGYVPLAGVLLSPKVFDVF
QKGSGIVYGHQTYQDHVFATGVALEIQRLIFDQNLIEECFEMGKYLGMALKRKFADNPYV
GDVRGRGLFWDVEFVADKATKEVFPASMNLAGIMHVRCIENGAHFLKGKGTIDSVLGDHM
MVSPAYTVTRVEIDRMIDVLANTLAEVLAENGYN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG