YALI0C05687g

Overview

Description similar to uniprot|Q6C2W3 Yarrowia lipolytica YALI0F04620g
Locus type CDS
Locus tag YALI0C05687g

Location

Species Yarrowia lipolytica Positions 729191..729994
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 804 (nuc.)
Previous locus YALI0C05665g Next locus YALI0C05709g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05687g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05687gYALI0C05687g_mRNA-001YALI0C05687g_CDS-001

Nucleotide sequence

 

>YALI0C05687g
ATGAAGTTCTCCGCCGTTGCCGTTGCCGCCGTCGCCTCCAGTGCTCTGGCTGCTCCCTCC
CCCCGACTCCAGTCCCGGGAGATTCTTGTTTCCGGCGAAAATGCCGCCCAGGTGGTGGCC
GACTTCGCTCCTGTTTTCTCGCTCGCTCCTGGCTCCTTTGCCGCCCAGGCCCAGCAGTCG
GTTGGATTCCTTGACTTCTCCGGTTACATCAACTTTGCTGTTGGCCTTCTGCAGACCGGT
GGCCAGTTCCTCAAGGACACCGGCAAGGCCATCACTGACCTGTCTCTCAACGAGCTGGGC
CAGGCTATCTCCAACGCTCTTCTGGGCGTGCTCAAGTACCTCAACGCCTTCCTGGACGTG
GTCAAGGGCGGTACCCGGTTCGACCAGGCCGTCTACGCCTTCATTATCAACTCCGGCCTC
AAGGACTTCCTCACCAACGTTGGAATGTGGATTGTCAACCTGTCGCAGAAGATTCTCATG
TCGCCTCTGCTCAACAACATTGTCGATATTCTTAAGAACCTCTTTGGCTGGCTGTTTGGC
TCCAAGCAGACCGTCCAGAAGACCCTCGGCGACCAGGCCGACACTTCGGGCTTCGACCGA
GCTATGCTCGCCGTCCAGTCGGTCCAGTCGGCCGCCCAGCAGAAGCTCGATGGCCAGAAG
AACAACTAAGTCAGTCCTTCCCCTCATTTGTCATCTGTCAGTTTTTCTGCAGTTTAGTTT
CGGATTCCCGGTATTTATCAACGTTGTGATGACGACAACGAGAGTATTAACATTAATTAA
TTCCCCAGTGGTCATTTAGGAGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05687g_CDS-001

Protein length: 223 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0C05687g_CDS-001 MKFSAVAVAAVASSALAAPSPRLQSREILVSGENAAQVVADFAPVFSLAPGSFAAQAQQS
VGFLDFSGYINFAVGLLQTGGQFLKDTGKAITDLSLNELGQAISNALLGVLKYLNAFLDV
VKGGTRFDQAVYAFIINSGLKDFLTNVGMWIVNLSQKILMSPLLNNIVDILKNLFGWLFG
SKQTVQKTLGDQADTSGFDRAMLAVQSVQSAAQQKLDGQKNN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG