YALI0C05731g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0C05731g

Location

Species Yarrowia lipolytica Positions 739030..740244
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1215 (nuc.)
Previous locus YALI0C05709g Next locus YALI0C05753g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05731g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05731gYALI0C05731g_mRNA-001YALI0C05731g_CDS-001

Nucleotide sequence

 

>YALI0C05731g
ATGTTAGCACATGTTATACACCTGGTCCTGCCGCACCTCGCGGCCAAGGACACCAAGAAC
CTGTCGCTGACGTCCCGAGACCTCTACAAGACCATGGTGGCTCTGGAAGCGCGCCACTTT
CTCGCCAGCAAAGACATCTGTCCCTGGAGCCAGCCGTTCGACTTGTCGTGGAAACAGGTG
GCCGAACAACTCATTCCCCCGGAGAAATTCAAGCAGATTCCCCACCTGGACCTCAATCTC
CACCAGCACACACCGTTTCGACCCTCCCCTCTTTCGCTCTTGTCGGAATCGGCCCAGGGA
CACTTCACTCTGGTTGAAGAAGAGGAGTTCATTCACGAGGAGCTGTGGGACACTCTGGTT
CCCGACTCGGCGCTCATTTGCGACGCCATGTATCAGGACCCGACTCGAGTCCGGTTGGAG
CAGGTCCAGACCTCCATTTTCGACAACAACTCCCTCGACGACCCATTTTTCGACCTCACG
ACCGGCACCCGGGCGAAAACGCCCAGACAGACCCAAACGTCGCCCCAATCGCCCCCCAAT
GCCTTCTCCTTCTTTGCTAAAAACCGCCAGTGGACCTTCACGCTGCCCAACCCGAAAAAA
AACGAGTATCGGGTCACCGCAAAGGCATACACGCTGACGGGGTGTGCGGTTCTGGTCAAG
TCGAAGACCAGATGGCTTCTGGTACTTTTGGAGGAGGGCAAACAAACGACAATTGCCCTC
CCCATAGCTCTGACCCCGATTCCGGCCGGGGTGGCCACCTCTGGAGCTCACATTTTCATC
TGGGAACCGCTCCACACCGCCACCAGCAACCTGTACGTGGTTACCAATGGCACTTGCCAC
TTTCTGGCCTCCTTTAAGGGGACCACGGCGTTTCCAGCCCCCCTCTTGCACAACCAGACC
CTTCATCTAGTCCACAGAAACTCCATTGTCACCGTGGATGTCACTGGCAACAAAAAGATC
CAAAAGACAAGCCTCAACCTCCAGGGAAGACTTCTGGGCAACGTCCAGTGTCTGGGCGAC
AGATACCACCACATGTCCTACGGCTACAAGGGCTCCATCTATCGAGTCTTGCTCAACACC
GACACCAAACGGTACTGCGTGGTTCCCAAGCGTGACGACGACGGATACCTTGTCTATTGC
GACGGAGAGTGGAAGCGGTACTTTTTCAGTCCAAAATTCTGGGCCATCGAGCCTCTGAGT
CCCGTTTCCATGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05731g_CDS-001

Protein length: 405 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0C05731g_CDS-001 MLAHVIHLVLPHLAAKDTKNLSLTSRDLYKTMVALEARHFLASKDICPWSQPFDLSWKQV
AEQLIPPEKFKQIPHLDLNLHQHTPFRPSPLSLLSESAQGHFTLVEEEEFIHEELWDTLV
PDSALICDAMYQDPTRVRLEQVQTSIFDNNSLDDPFFDLTTGTRAKTPRQTQTSPQSPPN
AFSFFAKNRQWTFTLPNPKKNEYRVTAKAYTLTGCAVLVKSKTRWLLVLLEEGKQTTIAL
PIALTPIPAGVATSGAHIFIWEPLHTATSNLYVVTNGTCHFLASFKGTTAFPAPLLHNQT
LHLVHRNSIVTVDVTGNKKIQKTSLNLQGRLLGNVQCLGDRYHHMSYGYKGSIYRVLLNT
DTKRYCVVPKRDDDGYLVYCDGEWKRYFFSPKFWAIEPLSPVSM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG