YALI0C05511g

Overview

Description weakly similar to uniprot|Q06705 Saccharomyces cerevisiae YLR380w CSR1 weak similarity to SEC14 protein
Locus type CDS
Locus tag YALI0C05511g

Location

Species Yarrowia lipolytica Positions 701745..703385
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1641 (nuc.)
Previous locus YALI0C05500g Next locus YALI0C05533g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05511g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05511gYALI0C05511g_mRNA-001YALI0C05511g_CDS-001

Nucleotide sequence

 

>YALI0C05511g
ATGTCTTCTTCTCCAACCTCGTACCACACCATGACTTCACATTCGACCGCGCCCACGGAG
CCGCTGAGCCCCGAGCGCAGTGTGTCCACGGACATGGACAACAGCCTGCAAAGCCAGGAA
CACGAGATTCCGTCGTTCCAGAAAAACGTCAACAACCACGGCAGACTGCCGTTGACCATC
CAGCCCACCAAAGGCAGATTCGACACTCTCACGGCCAAGCAGATGGAACGACTCAAGCAG
CTGTGGGCCGTCCTGCTCAAGGCCATGAACGTGACCCAGAAGGTCATCGAGGTGGGCACA
CAAACGTCGCTGCCTCCCACACGAGTCAGATCAAGTGGGGGCACAGGCGCAGACAGCATT
TCATCCACGTCGACACGCGAGTCGGAAATGAGCTCGGCGTCCAGAAAGAAGAAACACGCA
CCCGAACATCTTGCCAACCTGTTTCTAGAACGCCTCGAGCCGGAGGAGGTCAAGCAGGCG
CTGTGGCACATGGCTCGAACCCTCACTCCCGACAACCTCTTGTGTCGGTTCCTGCGCGCG
CGGCGATGGTCGGTGCCCCGCACATGTGTGCTGCTCGAAAAAGCAATGTACTGGCGCATG
AAGGAGTCTGGTCTCGACGAGCTGCAGTTCCGGGGCGAGATTGGGGCCTTCAGAAGCAAC
GATATTGACTACATCAACCAGTACCGGTCAAAAAAGTCGTACATTCGGGGCAGAGACAAG
GCGGGCCGTCCCGTCATTCAGATTTACACACGGCGACATTTCAAAACAGACCAGTCAGTC
AAGTGTATTAAGGACTTCACTCTGGCCGTGTTTGAGGCGTCTCTGCTCATGTTGGACGAT
TACAACGACAATGTCACCTTCCTCTTTGACATGACCGACTTTACCCTCTTCAACATGGAC
TATCCTTACATGAGGCATCTGTTGAAGATGTTCCAGATCTTCTATCCCGAATCTCTGGGT
CTACTGCTGGTCCACAATGCACCTTGGGTCTACGAGGGTGTCTACAACATCATCAAGCAT
TGGATGGAGCCCTGTGTCACCTCCAAGTTCAAGTTCACCAAGAACCTCAAAGAGCTGTCA
CAGTACATTGATATGGACCAGATCCCCGAAGGTATGGGAGGAACGGATCAGTGGAACTAC
GAGTACATTGAGCCTCGAGAGCATGAGGCTGACAAGCTGCAGGACCATTTTGGCCGAGAA
GCTGCTCTTCAGGAGCGATCCATGCTCACCCAAAAGGTGGAAAAGAACACTGTCGAGTGG
CTCCAGGCGGTGCCTGGCAGCGAGGCCGAGGGAGAGACGCTTGATGAGCGACGAGTCATG
ATCGACGAGCTGAGAGACCAGTATTGGACGGTTGATCGGTACATCCGAGCTGTGACTGTG
AGTGATCGGTTAGGTCAAATTCCTGCCACCAGAGGGCAAGTGCATGCTTAACCACTGATC
TCTGAACGAAGAGCGGGCTAGTGGACACGTTGAGAGTGCGGTAGCATATGTTTGTGAGCA
GCAGGCTGTGAAAGGGCAACGAACACGATATCCTTATCATCTGTGCATGCGGTGGCCCAG
TCCAGACGCAGGCGTCTGCCCGCAAGTTATTTATCTAATTTCAGTAATCGCATTGTATAT
CACCTTGGAGAGTCGAGAACG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05511g_CDS-001

Protein length: 477 aa.
Product: Conserved hypothetical protein

>YALI0C05511g_CDS-001 MSSSPTSYHTMTSHSTAPTEPLSPERSVSTDMDNSLQSQEHEIPSFQKNVNNHGRLPLTI
QPTKGRFDTLTAKQMERLKQLWAVLLKAMNVTQKVIEVGTQTSLPPTRVRSSGGTGADSI
SSTSTRESEMSSASRKKKHAPEHLANLFLERLEPEEVKQALWHMARTLTPDNLLCRFLRA
RRWSVPRTCVLLEKAMYWRMKESGLDELQFRGEIGAFRSNDIDYINQYRSKKSYIRGRDK
AGRPVIQIYTRRHFKTDQSVKCIKDFTLAVFEASLLMLDDYNDNVTFLFDMTDFTLFNMD
YPYMRHLLKMFQIFYPESLGLLLVHNAPWVYEGVYNIIKHWMEPCVTSKFKFTKNLKELS
QYIDMDQIPEGMGGTDQWNYEYIEPREHEADKLQDHFGREAALQERSMLTQKVEKNTVEW
LQAVPGSEAEGETLDERRVMIDELRDQYWTVDRYIRAVTVSDRLGQIPATRGQVHA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG