YALI0C05500g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0C05500g

Location

Species Yarrowia lipolytica Positions 699409..700560
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1152 (nuc.)
Previous locus YALI0C05489g Next locus YALI0C05511g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05500g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05500gYALI0C05500g_mRNA-001YALI0C05500g_CDS-001

Nucleotide sequence

 

>YALI0C05500g
ATGTTGAAAAGCAAGAATTTGTCGGCCCTGCTTTCACAGTCATTGACCACGTTGCCGGAA
GAGCCCCCGTTATCGAGTGAGTATTTGGAGACTAGTCTGGGTGATACAACAGGTCGGAAC
GAACCGATAGAACAACGAGAGAACGACATGGGGAAAAAGGCACGGAATGGGATGACACAA
GAAGATGCTGCTGATCTGGAAGGTTGTTGTTTTTTAATATAAAGACCAGACGAAGGTGTC
AGACTGAAGTGACATTCTGCAGCTCCAACTGGTCAACACGACATGTGGAGTCGACTGGAC
TAGGGCAGAAGTTAGTTGAATGCAATGACTGAATGCAGTGACTGATACTTGTTACGTGTC
TCTCTCGCTCTGGTGTGACTCACATGGCCATGACATCGTAGAGCTCTCTTGCAAAAACCA
GCACGCACCAAGGCATTCATAGTCACAGCCGACAATGACGGTGACGCTCCCCTTCCCATC
AACGCATCCACCGTCACTTCTCTGTCTTTCTCTCTTTATCGTTACTACCAAGTTTCTCTC
GTTCATGACCCACGGCCATTCACAAATAGTTATTGATCGCTCCCGCTAACACAGCCTACG
GTACCACATCGAACCCTCCACCCGCCATCTTCTCCTCCCTCTTGGGCTCTGCTCTCGGTC
GAGAAATTGCCGCCTCGCATATCAATCCTAACGCCAAGTACCTGGCCCACTACCAGGGCC
TGGACTCGGACCAAATTGCATCAACAGAACAGCAGTGGCTCAACAGCGTGTGTTCGGGCG
AGTCCAAGAAAAAAGTGCATGTCATTCTCGCCGCCCAGACTTTTTCCGAGTACCTGAGGG
GCTGCACCAAGGCGCTGGACGGCTCCAAACCCAAATGGGTCACCATAGAGACCAATGACG
CGGTGTTTCTGGTGCGACAGATCGGAGGAGAGGAAGGACTGTTGCTGGTCACCGTGGCAA
CGAGAGGCACGCCCCTAGGACTGCTGTTTACAAAGACCGATGGAGTTTATTCAGAGCTGG
AAAAGGGTCTTGAAGGGTACAAGGTGGCGTAATTAATTGGTATGACTAACAGCATACTTG
TATATGTAATTACTGTACTATACTTACATATTCAATTATGCATCTACATGAATAAAGTAC
TTCAATCGGTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05500g_CDS-001

Protein length: 178 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0C05500g_CDS-001 MLKSKNLSALLSQSLTTLPEEPPLSTYGTTSNPPPAIFSSLLGSALGREIAASHINPNAK
YLAHYQGLDSDQIASTEQQWLNSVCSGESKKKVHVILAAQTFSEYLRGCTKALDGSKPKW
VTIETNDAVFLVRQIGGEEGLLLVTVATRGTPLGLLFTKTDGVYSELEKGLEGYKVA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG