YALI0C05533g

Overview

Description similar to uniprot|Q9ZS91 Arabidopsis thaliana T4B21.5 protein (Hypothetical protein)
Locus type CDS
Locus tag YALI0C05533g

Location

Species Yarrowia lipolytica Positions 707509..708108
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 600 (nuc.)
Previous locus YALI0C05511g Next locus YALI0C05537r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05533g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05533gYALI0C05533g_mRNA-001YALI0C05533g_CDS-001

Nucleotide sequence

 

>YALI0C05533g
ATGAGCAACAAGACCGATAGCGAGTGGCGAGCCGTTCTGTCGCCAGAGCAGTTCCGTGTT
CTGCGCGAGAAGGGCACCGAACGTCCCCACACCGGCAAGTACAATTCCACGTTCGACAAC
GGCACCTACAACTGTGCTGGCTGCGACGCTCCTCTGTACACGTCCAAGGCCAAGTTCCGA
AGCTCGTGTGGATGGCCTGCTTTCTACGAGGCCATTCCGGGCGCTCTGAAGCTCAATGTC
GACAAGACTTTGGGAATGACCCGAACTGAGATGGTCTGTGCCAACTGTGACGGCCATCTG
GGCCACATTTTCAAGGGCGAGGGCTACGATACCCCTACCGACGAGCGACATTGCGTCAAC
TCGGTTTCGTTGAGTTTCAAACCTGAATAGACCCGGCCCGGGTTTACTTGTTTACTGATT
TGAGATTCTGTTCAATCTCTCAGAGCAGGCTCTTCTCGATGTTCTGAGAGCACCGTCTGC
TGGCGTCGATCTAACACTCGTTGGCACCAACTGGGCATTATTGGCACACCAGGCTCTTCC
GTCTGGTAGGAGGAAAGCATGAGGGTATATAGTGTAAGCATGAGGGTTTGATAACGTCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05533g_CDS-001

Protein length: 130 aa.
Product: Conserved hypothetical protein

>YALI0C05533g_CDS-001 MSNKTDSEWRAVLSPEQFRVLREKGTERPHTGKYNSTFDNGTYNCAGCDAPLYTSKAKFR
SSCGWPAFYEAIPGALKLNVDKTLGMTRTEMVCANCDGHLGHIFKGEGYDTPTDERHCVN
SVSLSFKPE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG