YALI0C05489g

Overview

Description some similarities with uniprot|Q8NIM9 Saccharomyces cerevisiae YCL034W LSB5 Protein of unknown function
Locus type CDS
Locus tag YALI0C05489g

Location

Species Yarrowia lipolytica Positions 697854..699427
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1574 (nuc.)
Previous locus YALI0C05467g Next locus YALI0C05500g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05489g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05489gYALI0C05489g_mRNA-001YALI0C05489g_CDS-001

Nucleotide sequence

 

>YALI0C05489g
ATGGGCTTCCTCTCATCCGACAAACCATACACAGCCGTCACCTCCACCATCGAGTCTCTC
TGTGGACGAGACTACGAGGAGGAGGATGTGGCCGACATGGTCGAGCTCATGGAAATCATT
CAATTGCGTCCCGACGGACCCACCGAAGCCGCCCGGGCTCTCAGAAAGAAACTAAAGTAC
GGCGGCAAGCATGCCCAACTCAGAGCTCTGGTGATTCTCGACACCTTAGTTGAGAACGGA
GAACGGCTCTCCATGCTGTTTAACGACACTCAGCTGATTGACCGGCTCAAAATTGTCGTT
TCCGGCGCAGAAGGCCTGCATCCCATGGACTCTGCCGTCCAGAAGAAGGCCCAGGCCTAC
GCCAAGAGCTGGAGCCGATACAAGGGCAAGAGAGGCTACGAGGGTATCTCCTCTCTGTAC
AAGGGAGGTGCCACATCCAGCGCTGCTGCCAGATCACGGGCAAGCAGCTACGGCAACGGA
GGAGCAGGAAATTCTGGCTCCGGAAGACGGTCCTCCAGATACTCTAACCGAGTCGAAGAC
CTGTCTGAGGACTCGGACGACAGCCGAGATGGAGGCTACGACTCGCCCCCTCCCCGATCA
CGCGATTCTCCCCGTGCACGTGCGTCTCCACGAACTCCACGTGACCGGTCTCCCTACTCT
GACGAAGATAGACCCAAGCGGTCTAACCGAGGTAGTGCTCGTTACGAGAGAGGGTTTGAC
GACGAGCCCCGATCCTCGTCGAAACCATTCTTTTCGTCCAAAACTCGAACACGAGGAAGC
ACGCCCGTGGATGACTACGATGAGGAAGATGAGCCCGGAGAACGACCTCAGTTTTCCAGC
CGAAACCGGCGCTCTGGAGGTGGAGTAGCGGACTTTGAGGACAGAGAAAAGACGGAAAAG
TCGTCGAAACGTTCGTCTCTGTCGAAATTCTTCAAGGGCTCTTCTCCCGAGCCTGCCTCA
TCGTCTGCTCGAGGCTCTACGCCCTCCGGACTGTCCGCATCTTCTTCTAATGCTCCCCTG
AATGCCAAGGTTGAGAAGCCGCGTATCCAGGAGGTTTTGGCGGAGTCTCACGTTGCAGCT
ACCAACCTGAACAACGCTCTCAGAATGGTCAACAAGGATAAGGGCCAGTTGAGTACCCAG
GACGCGTATGCCACTGAGTGTTTCAACAAGTGCCGAAAGTTGCGAAAGAAGGTGGTGCGA
TATATTCACGGTATCCACGATGGCGAATATGTAGGTCCTCTTCTTCATGTCAACGAGGAG
CTCATTGCTGCTCTGCGGCACTACGACAAGTTGGCGTCTGTCCATGGCTCTGATTCTGAG
CCCGAGGATGATTGGAGAAACGAAGATGGAGTAGATGAAGTCACCGAGCAGGTGGCCAAG
ATCAGCATCCCTAAACGAGCTCCTCCACCCATCCCGAAGAAGCCCAAGAACTTGCATTAT
TCGGATGAGGAGGATGACAATCCGTTTGGAGATGATAATGAGTTGTAGAAGGGAAACAGA
TGGGACACCTTCCTTCCACCACTCGATGATGCTGAAATGCTATATGTACGATAATGAACC
GATTGAAGTACTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05489g_CDS-001

Protein length: 496 aa.
Product: Conserved hypothetical protein

>YALI0C05489g_CDS-001 MGFLSSDKPYTAVTSTIESLCGRDYEEEDVADMVELMEIIQLRPDGPTEAARALRKKLKY
GGKHAQLRALVILDTLVENGERLSMLFNDTQLIDRLKIVVSGAEGLHPMDSAVQKKAQAY
AKSWSRYKGKRGYEGISSLYKGGATSSAAARSRASSYGNGGAGNSGSGRRSSRYSNRVED
LSEDSDDSRDGGYDSPPPRSRDSPRARASPRTPRDRSPYSDEDRPKRSNRGSARYERGFD
DEPRSSSKPFFSSKTRTRGSTPVDDYDEEDEPGERPQFSSRNRRSGGGVADFEDREKTEK
SSKRSSLSKFFKGSSPEPASSSARGSTPSGLSASSSNAPLNAKVEKPRIQEVLAESHVAA
TNLNNALRMVNKDKGQLSTQDAYATECFNKCRKLRKKVVRYIHGIHDGEYVGPLLHVNEE
LIAALRHYDKLASVHGSDSEPEDDWRNEDGVDEVTEQVAKISIPKRAPPPIPKKPKNLHY
SDEEDDNPFGDDNEL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG