YALI0C05280g

Overview

Description similar to uniprot|P36132 Saccharomyces cerevisiae YKR038C KAE1 Probable tRNA threonylcarbamoyladenosine biosynthesis protein
Locus type CDS
Locus tag YALI0C05280g

Location

Species Yarrowia lipolytica Positions 670017..671171
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1155 (nuc.)
Previous locus YALI0C05258g Next locus YALI0C05302g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05280g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05280gYALI0C05280g_mRNA-001YALI0C05280g_CDS-001

Nucleotide sequence

 

>YALI0C05280g
ATGACGACTTATCTGAGCTTGGGACTGGAAGGCAGCGCCAACAAACTGGGGGTGGGCGTA
ATCAAACACACGGTGACGGATGCCAACGCCGAAAACGGCTTTTCCACCGACATTCTGTCC
AACATTCGAGACACCTACATCACTCCTCCAGGCGAGGGATTCTTGCCACGAGACACAGCT
CGTCACCACCGAAACTGGGTGGTTCGAATCATCAAACGGGCACTCGACGAGGCCAAGATA
TCCGACCCTACAAAACTGCATTGCATTTCGTTCACCCAGGGTCCCGGTATGGGGGCTCCT
TTGCAGAGCGTGGTGATTGCTGCACGAACCATTGCTCAAATGTGGGGAGTTCCGCTTGTG
GGCGTCAACCATTGCGTGGGACACATTGAGATGGGCCGAACTATCACGGGCGCCACAAAC
CCCGTGGTTCTGTACGTCTCTGGAGGAAATACACAAGTGATTGCGTACTCCAAACAGCGA
TATCGAATCTTTGGAGAGACTCTTGATATTGCTGTCGGTAACTGCTTGGATCGGTTTGCA
CGGGTGCTGAAGATCCCCAACGCCCCCTCACCAGGATACAATATCGAGCAGCTAGCCAAG
AAGGGCAAAAAGTACGTTCCATTGCCATACACCGTCAAGGGCATGGACCTGAGCATGTCT
GGTGTGTTGCAGTTTGTGGAGTCTCTGGCAAAGCGGTTTCAGGCAGGAGATCTGGTGGTT
GATGGACATCAGGTGACCGCCGAAGATCTGTGCTTTTCGCTACAAGAAACGCTCTTTGCC
ATGCTCGTCGAAATCACTGAAAGAGCCATGGCCCATGTCAACTCTCAGCAAGTACTTATT
GTGGGAGGTGTTGGGTGCAACGAGCGACTCCAGGAGATGATGGGAATCATGGCACGTGAC
CGAAACGGCTCCGTCTACGCCACCGACGAGCGTTTCTGCATCGATAACGGTATCATGATT
GCCCATGCTGGTCTTCTGGCATGGAGACAGGGCTTTGAGACGAAAATGGAAAAGACCCAG
TGCACTCAGAGATTCAGAACTGACGAGGTACTGGTAGATTGGAGAGTTTAACACACACTC
ACAAGGAGTATGTATGGTATATATAAGTGTAATAATACACTGTAACGAGTACATGACGGT
ATGTACCTGTATTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05280g_CDS-001

Protein length: 357 aa.
Product: tRNA threonylcarbamoyladenosine biosynthesis protein, putative

>YALI0C05280g_CDS-001 MTTYLSLGLEGSANKLGVGVIKHTVTDANAENGFSTDILSNIRDTYITPPGEGFLPRDTA
RHHRNWVVRIIKRALDEAKISDPTKLHCISFTQGPGMGAPLQSVVIAARTIAQMWGVPLV
GVNHCVGHIEMGRTITGATNPVVLYVSGGNTQVIAYSKQRYRIFGETLDIAVGNCLDRFA
RVLKIPNAPSPGYNIEQLAKKGKKYVPLPYTVKGMDLSMSGVLQFVESLAKRFQAGDLVV
DGHQVTAEDLCFSLQETLFAMLVEITERAMAHVNSQQVLIVGGVGCNERLQEMMGIMARD
RNGSVYATDERFCIDNGIMIAHAGLLAWRQGFETKMEKTQCTQRFRTDEVLVDWRV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG