YALI0C05258g

Overview

Description weakly similar to uniprot|P38840 Saccharomyces cerevisiae YHR137w ARO9 aromatic amino acid aminotransferase II
Locus type CDS
Locus tag YALI0C05258g

Location

Species Yarrowia lipolytica Positions 666974..668641
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1668 (nuc.)
Previous locus YALI0C05236g Next locus YALI0C05280g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05258g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05258gYALI0C05258g_mRNA-001YALI0C05258g_CDS-001

Nucleotide sequence

 

>YALI0C05258g
ATGTCCTTCCACGACAAGTTCATTTCTGACCGTTCAAAGGCCCGGTCTCATTCCCATTTC
ACGCTCAACCAGACGGCCAAGACAACCAAACCCCATTCCAACCCGATTTTCATCTCTGGA
GGTCTTCCCAACCCCATTGGGTTCCCCATTGACGAGATCACCGTCAATCTGACCACCAGT
CCCAATCCCCGACCTCGATTTGTGCCTGCTGCGACTCTGTTTTCCAAGCCAGGACTGGTC
GAGTTCCCCGACATCACCGAGAATAGCACCCGGTTGAGCCAGAACCTCAAGATCCTCAAG
TTTGCCGAGTCGCTGGAAACTGCGACAAACGGCAATGGCGGCCAGCTGACTCTCGAGCGA
TCTCTCCAGTACGGCGAACAAGATGGTCACCCGCAGCTCAAGAAATTTGTGACGGCCCTC
ACCAAGCGCCTCCATCCCCCCAAGCTGGACGAGAAGGACTGGAACGTGATCATCACCAAT
GGCGGTGGAGACGGTATTCACAAGGCCGTGGACCTGCTCATTAACCCTGGAGACCATGTC
CTTGTTGAGGAGTACTGCTTCTCTCCCTCCTTTGACAACATTAAATCTGTCGGAGGTATT
CTTGTTCCCATCAAGCTAGATTATGACGAGGGACTCGACGTGACTGGTCTCAAACGGATC
CTTGAAAACTGGGATGAGGCCAAGCAGGGACCCAAACCCCGAGTTCTGTATAGTGTTCCT
TCTGGCCAGAATCCCTACGGAGTCTCCCAGTCTCTGGAGAGACGTAAAGCAATCTATGCT
GTTCTGAAAGAACATGGGATCGTCATCATCGAAGATGATCCCTACGGAGCCCTGGCCTAC
GAGTCCTACAACAAGAAATTCACCAACGGCAACTCCTCCAAGTCTCTGAACACTCCGGAG
AAGGCTCATGACGAGTCTGTCGACTCTGAGGCACGTGAATCCGACATCTCCAAGGCTGAT
ATCGACCATTACACCTCCTTGATCGCTCCCTCTTACCTCACCATTGATGATGTAGGACTG
GTTGTTCGAATTGACACTTTCTCCAAGGTATTTTCTCCGGGACTTCGACTTGGGTGGATT
GTCAGTCACGTCAACTTCATTGAGAAGCTATCTCTATACACTTCTCTTTCAACCCGGGCC
GCTTCCGGCGTTTCTCAGCTGCTGATCAACAACATTGCTCACTCTTGGGGTCTTGAGGGC
TGGTTGCGTTGGTGTCTTCTGTTGCGAAACCAGTATCTGGAGCGACGAAACCACCTTCTA
GCCCAGCTGGACAAGCTCGACCAGTCCAAGATCACCTACATCACGCCTGTCTGTGGTATG
TTTGTGTCTGCGCTTGTTCATTTTGATAAGATTGCGTCTTCGTCGTTTAATGGCGTCACT
CTTCCCTACCAGTCGCGACTGGTGGAGCTTGGAATCGAGGAAGGAGTTCTGATTGTTTCT
GGATCCAATATGGCTGCTTCCGAAGAGCTGCGTCAAACGGCCAAGTTCATTCGACTCACT
TTTGCCTATGAGGATCCCGATCTGCTCGACGAGGCTATCAAGCGATTGGGTAAGGCGGTG
GACCGGCTTTTTGAGGAGGGTGAGATTAAGCAGAAGTAGGTGTTTTCTGTATAGTACAAG
TACATACTGTACCAGTATCGGTAGATCCAATACAAGTTCATCTATTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05258g_CDS-001

Protein length: 533 aa.
Product: Conserved hypothetical protein

>YALI0C05258g_CDS-001 MSFHDKFISDRSKARSHSHFTLNQTAKTTKPHSNPIFISGGLPNPIGFPIDEITVNLTTS
PNPRPRFVPAATLFSKPGLVEFPDITENSTRLSQNLKILKFAESLETATNGNGGQLTLER
SLQYGEQDGHPQLKKFVTALTKRLHPPKLDEKDWNVIITNGGGDGIHKAVDLLINPGDHV
LVEEYCFSPSFDNIKSVGGILVPIKLDYDEGLDVTGLKRILENWDEAKQGPKPRVLYSVP
SGQNPYGVSQSLERRKAIYAVLKEHGIVIIEDDPYGALAYESYNKKFTNGNSSKSLNTPE
KAHDESVDSEARESDISKADIDHYTSLIAPSYLTIDDVGLVVRIDTFSKVFSPGLRLGWI
VSHVNFIEKLSLYTSLSTRAASGVSQLLINNIAHSWGLEGWLRWCLLLRNQYLERRNHLL
AQLDKLDQSKITYITPVCGMFVSALVHFDKIASSSFNGVTLPYQSRLVELGIEEGVLIVS
GSNMAASEELRQTAKFIRLTFAYEDPDLLDEAIKRLGKAVDRLFEEGEIKQK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG