YALI0C05302g

Overview

Description some similarities with uniprot|Q9P887 Candida albicans Sec20p
Locus type CDS
Locus tag YALI0C05302g

Location

Species Yarrowia lipolytica Positions 671177..672204
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1028 (nuc.)
Previous locus YALI0C05280g Next locus YALI0C05313r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05302g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05302gYALI0C05302g_mRNA-001YALI0C05302g_CDS-001

Nucleotide sequence

 

>YALI0C05302g
ATGTCCAATCTCGATCCCCTTATTGAGACATGTCTGTCACTCATCTCACGGCTTCAGCGG
TTTGGTACACACTCTCTGGCGTCTCGAGACGTCCGTCAAGAGCTGGCCGACCTCATCCAG
ACCAAACTGCGTGATCTGGACACGGAATTCGCACGATACAAGGCCACATGCCCTCAAGAC
ACGACGTCGCAGATCGCACTCGAATCATATACGGAACAAATCGCCAACCTGCGTGTGCTG
TACCGAAAGGCCCAGGTGACCAGTGCAAAGAATGTGGAGAAATCGCTGCTCAAGGAACGA
CAAATGCTGTTTGAGGGCCGCAAGGAAGTCAAGGAGGAAGCCAGCGAAAAGGCAGTGCTC
AACAAGTCTCGTGATATTACTCAATCGCTCAAGCGGGTTCATCAACTGGCTTCTCAGAAT
GTTCTGAGAGGAGAAATGCACTTAGAGAGCCTGGACGAATCGTCGCGTGACATGCAGATG
CTGCAGCAAAAGTATACCACCTTTGACGTGCTTTTGGCAGGCTCCAAGAAGCTGGTTCGA
CATCTTGAACAGGCTGACAAGCAGGACAGAATTCTAATGATGGCTTCTATGGGATTTTTG
GCGCTTGTGGTGGCGTGGATTCTATACAGACGGGTGTTGAAGCTCCCCCTGATGATCATC
ACATGGCCCCTTCTCAAATTGTTTGGAATCGTTCGAGGAAGTGGTCCTAAGATTCCCAAA
AACCCAGGTAACCCTGTGCAGGGGTTGGTTGACACGTTAGTCGATACAGTGGTGGAAGCT
ACTCCGTCTGTGGGCATGGAAACATTGGTGGATACCTTGGTGGAGACGTTGGAAACGGCA
CTGTCGTCTACCATTGCAGCAGATATAGACCTGGAGCTTCCAGTTGTGTCTGAGCCTCTG
GACGATACTCTTCCTGACAGCGGTGTTCCCGAACAGAAGGAGGTTCCCATTCGAGATGAG
TTGTAAAGCTCCAAACTCGCAAAAAAAAGCAATACTGTAGCTAATGTAATACAATGATCA
AAGTCACG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05302g_CDS-001

Protein length: 322 aa.
Product: Conserved hypothetical protein

>YALI0C05302g_CDS-001 MSNLDPLIETCLSLISRLQRFGTHSLASRDVRQELADLIQTKLRDLDTEFARYKATCPQD
TTSQIALESYTEQIANLRVLYRKAQVTSAKNVEKSLLKERQMLFEGRKEVKEEASEKAVL
NKSRDITQSLKRVHQLASQNVLRGEMHLESLDESSRDMQMLQQKYTTFDVLLAGSKKLVR
HLEQADKQDRILMMASMGFLALVVAWILYRRVLKLPLMIITWPLLKLFGIVRGSGPKIPK
NPGNPVQGLVDTLVDTVVEATPSVGMETLVDTLVETLETALSSTIAADIDLELPVVSEPL
DDTLPDSGVPEQKEVPIRDEL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG