YALI0C05236g

Overview

Description similar to uniprot|Q6CC46 Yarrowia lipolytica YALI0C12551g, polyketide cyclase/hydratase domain containing protein
Locus type CDS
Locus tag YALI0C05236g

Location

Species Yarrowia lipolytica Positions 665580..666089
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 510 (nuc.)
Previous locus YALI0C05192r Next locus YALI0C05258g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05236g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05236gYALI0C05236g_mRNA-001YALI0C05236g_CDS-001

Nucleotide sequence

 

>YALI0C05236g
ATGTGTATGTTTTTCTTCACCCCCATGCCTGTCACCATTCGCACTGAAATCACAATTGAC
GCTTCTCCAGAGTCGGTTTCGGCCATTCTGTTTGATTTCAACAACTACCATAAATGGAAT
TCGTGGATCTCCATCTCGGGACCTCCGCCACTATCCCACAAATCAACCTATTATCTCTCT
CTGGTAGGAGAACAACTTACAATGGACCAAGGAGAACTTCACTATGCACCTGTGATCATG
CTGGCATCTCCAAGTGTTTTGAAATGGACTTGGTACGAGAAACACAAGTGGTTCATGTCT
CATGAACACTACTTTGAGATTGTTCGCTCCCAAAATGACTCACAAAAATGTATCTTGAGA
CACGGAGAGAGATTCTCAGGGGCAGGAGCAAGAGCGATGTGCTATACCAAGTACTATCAG
AAGATACAGGCAGACTTTGAAGGTTTCAATAAAGAACTGCGCATCCTGGCGGAATCCAGA
GACATGGTGGAGATGATTTCCAAGAGTTGA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0C05236g_CDS-001

Protein length: 170 aa.
Product: Conserved hypothetical protein

>YALI0C05236g_CDS-001 MCMFFFTPMPVTIRTEITIDASPESVSAILFDFNNYHKWNSWISISGPPPLSHKSTYYLS
LVGEQLTMDQGELHYAPVIMLASPSVLKWTWYEKHKWFMSHEHYFEIVRSQNDSQKCILR
HGERFSGAGARAMCYTKYYQKIQADFEGFNKELRILAESRDMVEMISKS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG