YALI0C05060g

Overview

Description weakly similar to uniprot|Q8WZY8 Neurospora crassa Conserved hypothetical protein
Locus type CDS
Locus tag YALI0C05060g

Location

Species Yarrowia lipolytica Positions 647262..649200
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1939 (nuc.)
Previous locus YALI0C05038g Next locus YALI0C05082g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05060g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05060gYALI0C05060g_mRNA-001YALI0C05060g_CDS-001

Nucleotide sequence

 

>YALI0C05060g
ATGAACAACAACCCGTACCAGTCGTTGTCGCGCAACCGATTTGCTCCCATGGCGCGCAAG
GGCAGCGAGGACATGTCCAACGCGGGATCGGGGCACTTGCAGCACGCACAGCTGCCTTCT
AACATGCCGACACAACAGGGACAACAGGGTCAACAACAGGGTGGTCCAGGACAACAGGGT
CATATGGGCCAGGGTCCTGGGCAGGGACAGGGGCATATGGGTCATGGACTAGGCCCTCCA
GGGCAGCAGGGCATGCCGGGCCAGGGTTCTCCTCAACCAGGACCCCCCCAAGGTCTGGGA
ATGGCTGGTCATACACCCCAGCCCGGTCATAACCAGCCGAATCCCAACCCAGGTCACACT
CCTCAACCTGGTCATAACGCCAATCCGGGCCATACGCCCAACCCAGGCCATACTCCTAAC
CCTGGACATCCACAGAACCCCCAACAGCAACAGCAGCAGGGCCAGCCGGGTATGCCTAAT
CATACGCCTAACCCCGGCAACGCTCCTACGCCTGTTCCGGGCCCCAACCCCGGTCCCGGC
GTCTCGGGCCCCTCACCTAACCCCGCGGGACTGGGACAGCCCGGAATGGCACAGCCTGGG
TTAGGACAGCCCGGCCAGATGGGCCCTGGAGGCCCGAATTCGAATCCAGCGTTTGCTGCA
GCCCAAGCTGCCAAACTGCAGGCTATGAACCGTATGGGAAAACCAATTCAGCCTGCTCAA
GGATTCCGGAAACAGATCGTCGGTACCGCTATTGTGCGTCTTTTGCAGTACTGCGAGATT
CTGGGAACCACCAACGAGGCAATTCTCACCGATATCAATTTTTGGAAGAAGTTTGTCGGT
GATTTCTTCTCTGAAAATGGACTCATGCGGTATTCCGTGTCTAACGGTAAAGAAACGAAG
CAATTCGAGGTCCCCTTGCAGATCATCCCGCGATATTATCACACGTTCTTCATGAGTAAC
ACAAAACGGATTCAGATTGTGCTGGAGAACCCGCGTGAGTTTCTCACATCCCAGTCGGGC
CATTTTGTGCAATGTACTAGGGCCTCTGTGATTTATACCTTTAAGGATGGCGTTTCTGTG
GTCTCCACTGGATCTATGAGAACTCTCCTGAATCGGTTTTTGCGAATCGAATGGCTGGAT
TTCCATACTCTGGAGCATCAGGAGATGGTTCTGCGTCAAAACATCCCCCAGATGATCCAG
TGGGATAGAGACAACAATCAGGGTCAGAATAACAACGAGGGGGGGCCTCCTTTTAGTCTG
AAACCCTCGAACGTCACGTCTTTCGGAGTGGCTAGCTCTGTGATGCGGTGTCTTGAGATC
TCGGAAACAATGTCTCATATGCGCGACCTTATGATGTTTTCGCTCCAGACTAATGTCACT
GGTCCTCTGCATGCACTCGAGACCTTTTCCAAGGTTCTCCAGAACCGAGATCAGGGTCAG
GCAGCGGGATTAGGACAAGCGCCAGGGCTTGGACAGCCTCAGGGCGCTGGAATGGGACCT
GGACAGGGTATGCCTGGTATGGGTGGTCCTGGAATGGGACCTGGAATGGGACCTGGAATG
GGTGGACCCGGTATGGGAGGTCCCCATGGACTTCAAGGACAGCAGCAAGCTCAGCAGCAA
GGCCAACTAGGCCAGCAACAAGGCCAGGGTCAAGGTCAAGGCCCGGGTCAAGGACAAGGT
CAGGGCCAACCCGGACAGGGCCAGCCGGGACAAGGACAGAAGGGGTATGATTTTGAAAAA
AGTCCCAGGAGTAAGAGGAGGAGACAGAGTAAGGATGAGAAGTGACGAGTGAAGTTATCA
AGAACATATCATGAGTCGGAGCTCACACGATGCGGCTTTTAGAAACATGCATTACCAGTT
TCTTCTGTCTCATCCGCTCACTCATCCTCTAACCCTGCTAACTATAGATTTGTAAAGTAT
TGTATTATTTAATTCACCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05060g_CDS-001

Protein length: 595 aa.
Product: Conserved hypothetical protein

>YALI0C05060g_CDS-001 MNNNPYQSLSRNRFAPMARKGSEDMSNAGSGHLQHAQLPSNMPTQQGQQGQQQGGPGQQG
HMGQGPGQGQGHMGHGLGPPGQQGMPGQGSPQPGPPQGLGMAGHTPQPGHNQPNPNPGHT
PQPGHNANPGHTPNPGHTPNPGHPQNPQQQQQQGQPGMPNHTPNPGNAPTPVPGPNPGPG
VSGPSPNPAGLGQPGMAQPGLGQPGQMGPGGPNSNPAFAAAQAAKLQAMNRMGKPIQPAQ
GFRKQIVGTAIVRLLQYCEILGTTNEAILTDINFWKKFVGDFFSENGLMRYSVSNGKETK
QFEVPLQIIPRYYHTFFMSNTKRIQIVLENPREFLTSQSGHFVQCTRASVIYTFKDGVSV
VSTGSMRTLLNRFLRIEWLDFHTLEHQEMVLRQNIPQMIQWDRDNNQGQNNNEGGPPFSL
KPSNVTSFGVASSVMRCLEISETMSHMRDLMMFSLQTNVTGPLHALETFSKVLQNRDQGQ
AAGLGQAPGLGQPQGAGMGPGQGMPGMGGPGMGPGMGPGMGGPGMGGPHGLQGQQQAQQQ
GQLGQQQGQGQGQGPGQGQGQGQPGQGQPGQGQKGYDFEKSPRSKRRRQSKDEK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG