YALI0C05038g

Overview

Description similar to uniprot|C4R299 Komagataella pastoris Protein with DNA-dependent ATPase and ssDNA annealing activities involved in maintenance of genome
Locus type CDS
Locus tag YALI0C05038g

Location

Species Yarrowia lipolytica Positions 644414..646422
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2009 (nuc.)
Previous locus YALI0C04994r Next locus YALI0C05060g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05038g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05038gYALI0C05038g_mRNA-001YALI0C05038g_CDS-001

Nucleotide sequence

 

>YALI0C05038g
ATGGTATCTTGTCCTGTCTGTGGCAAATCCGTCGATCTGGCACGTGTCAACGCCCATCTA
GACGAAGGCTGTCCCGATGAGGCGCCAGAAAACACACCCAGCAAGTCGTTTCTGAAACGC
GAACGCCGCGATAAATCCGAGTTCGAAACGCCCAAGAAAAAACCGTGCTCCAAGACCGTT
TTTTCACGCAGATCTCCATCCGAATCTGAGTCTGATTTTACACAACGACAGAGAATGACG
CTGGGTCCTAAACCGGAGGGAAGAAAACTCGACTTTGGTGCTCCGGCATCCGTGGATCCG
TCTCCAGCTGCTCCTCCCACCCCAGCTGCTCCCAAATCAGCAGCAACCAAAGAACCTGCT
CGTCACACGCCTCTTCCTGAATTGTGTCGACCACAAACGTTGGACGACATTTCGGGCCAA
AAGGAGCTGATGGCTGTATTGCGGCGGTTTGTAGCGTACGGCCGGATCCCCTCAATCATC
TTCTGGGGCCCTCCAGGTGTTGGAAAAACGACTTTGGCCCGGATTCTGGCCAAGACGTCA
GGCAATCGGTTTGTAGAGCTGTCAGCAACTCAGAATAACGTGGCAGATGTGAAAAAGGTG
ATTGATCAGGCAAACAACGAGTGGAAGCTGCTGAAACGAGGAACTATTCTGTTCATTGAC
GAGTTGCATCGGTTTTCAAAGGCTCAACAGGACGTGCTTCTGCCTGCAGTTGAAAAGGGA
GACATTACATTGATTGGAGCGACTACAGAGAACCCCTCTTTTCGCCTAGTGGGTGCTCTG
ACGAGTCGATGTCGAGTTTTGACTCTCAAGAAGCTGTCCATGAAGGATATCAAGGAGGTT
GTGGAACGCAGTCTTGTTAAGTACAATGATACAGCTGAACACGAGGTGATTTTGCCAACA
GAGGTGATCGACTACATTGCTGGCATTGCCGATGGAGACGTGAGAAGCGCCTTGAACATC
CTGGAGCTCGTGGTTTCTGTTTGTGACATTGTTGAGGAGCAGCCTGAGAAGGCAGTAGAG
GAGGAAAAACCTGAGGAAACCAAAGACACCACCACCGAAGCCTGCGCGGCCAACGACACC
ACCGACGCCACAAATGAAGCAACACCAGATGATAGTGCCATTTTGAGCGATAGTGAGGCT
GCTGAAAACCCTGCTTCAAGCTCACAAGACGCCAGCTCTCAACTGACTGTCACTGCATCA
CCACCAAAGAGATACCGAACCACAACGCTTCGGGAGATAAAAAACGTGATCAGAAGAACA
CACGTGCTGTACGACAAGAACGGTGACAATCACTACGATGCCATTTCTGCATTTCACAAG
TCCATCAGAGGCTCTGATCCAGATGCCACCCTGTTTTACCTCGGAAAAATGCTCAAATCT
GGTGAGGATCCGCTGTATATAGCACGCCGAATGGTTCGAATTGCCTCGGAGGACATTGGA
TTGGCAGACGACAGTTTGTTACCTCTATGTACTGCTGCTTATACTGGTATCCAACAAGTG
GGCATGCCAGAAGGAGATTGCATTCTTGCCCATGCTGCCGTCAAACTGGCACTAGCAGAC
AAATCCGTCAAAGTGTACAAGGCCTGGGGCATGGTTAAGGAGGCTCTTTCCGATGAACAT
GGTCTGCTAGCCGCCGAGATTCCCATTCATCTCAGAAATGCTCCTACCAAGCTTATGAAG
GAGCTTGGATACGGAAAGGAGTACAAATACAACCCGCGGTTCCTGGGTGGCAAAGTCAAA
CAGGATTACATGCCTGAAGGGTATGAGAATGTCAAGTTCATGCCCGAGAGACACCTGGGA
ACAGAGATTGATCCGGAGTTGGAGGGAGAGATTATCGATGAGGAGACGGAGGCTGAGTAT
TATGGCGGTGTGATGATCTAGACATACAAAACACTCAAAAGTGGGCACGAGGCGAATGTA
GTTGTGTGATCCGCGTGACTACTGGGGTTTCGCTCTGCAATGCAACATGTACATACGAAC
TACTTGTAGTATAACCATGAACGTTTTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05038g_CDS-001

Protein length: 627 aa.
Product: Protein with DNA-dependent ATPase and ssDNA annealing activities involved in maintenance of genome, putative

>YALI0C05038g_CDS-001 MVSCPVCGKSVDLARVNAHLDEGCPDEAPENTPSKSFLKRERRDKSEFETPKKKPCSKTV
FSRRSPSESESDFTQRQRMTLGPKPEGRKLDFGAPASVDPSPAAPPTPAAPKSAATKEPA
RHTPLPELCRPQTLDDISGQKELMAVLRRFVAYGRIPSIIFWGPPGVGKTTLARILAKTS
GNRFVELSATQNNVADVKKVIDQANNEWKLLKRGTILFIDELHRFSKAQQDVLLPAVEKG
DITLIGATTENPSFRLVGALTSRCRVLTLKKLSMKDIKEVVERSLVKYNDTAEHEVILPT
EVIDYIAGIADGDVRSALNILELVVSVCDIVEEQPEKAVEEEKPEETKDTTTEACAANDT
TDATNEATPDDSAILSDSEAAENPASSSQDASSQLTVTASPPKRYRTTTLREIKNVIRRT
HVLYDKNGDNHYDAISAFHKSIRGSDPDATLFYLGKMLKSGEDPLYIARRMVRIASEDIG
LADDSLLPLCTAAYTGIQQVGMPEGDCILAHAAVKLALADKSVKVYKAWGMVKEALSDEH
GLLAAEIPIHLRNAPTKLMKELGYGKEYKYNPRFLGGKVKQDYMPEGYENVKFMPERHLG
TEIDPELEGEIIDEETEAEYYGGVMI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG