YALI0C05082g

Overview

Description similar to uniprot|P40525 Saccharomyces cerevisiae YIL052C (ohnolog of YER056C-A) RPL34B ribosomal protein L34.e
Locus type CDS
Locus tag YALI0C05082g

Location

Species Yarrowia lipolytica Positions 651256..652211
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 956 (nuc.)
Previous locus YALI0C05060g Next locus YALI0C05104g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05082g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05082gYALI0C05082g_mRNA-001YALI0C05082g_CDS-001

Nucleotide sequence

 

>YALI0C05082g
ATGGTCCAGCGAGTTACTTACCGACGACGAAACGGATGTATGTATGAGGAGCGAGGACGA
GCCGTGAGCGGCGGAGAGCGACTGATTCTGATTTGATCCGATTTACGACCTTCCAGGCAG
ACGACTGTGGCCCAGGCACAGAGGGACATGTTACACAGAAGGAGCTGGCATACACAAGAG
ACACTGCAAAATTTGTGCTGTGTATGATATGTGCTGATAGAAGGGGGGAAGAAGGATGAT
GTGGTCAAGATGGGGGGTTGTTTTAATGTCGGTATCTGTGGTTCTGCGTCACAAGTCAGT
TTAGCCAAGGCGGAATTATGACAAGACGAGACAAAAAACAACTCAGTCTGAACACGTACA
CTACGACAGCACATAAGTCGTAAATCGGTGGTACAGAGATCAGTCAGAAAGACATTTTGG
AGCGTGCGAGAGATTCACCATATTGATAGACGGTATCTTTCACACACTCGACTAGGTCTC
ATGTGCTCTCTGAAGGTCAGCTCAAGATGTGTGGTTCGCATGCCATCTCTCTCTCCCAGC
TAAAACTAACGCAGACAACACCCGATCCAACCGAGTCAAGATCATCAAGACTCCCGGTGG
AAACCTCCGATACCTGCACATCAAGAAGGCTGCCGGCCGACCCAAGTGCGGTGAGTGCGG
CATTGCTCTTGCTGGTATCCCCACCCTGCGACCCCGAGAGCTTGCTACCGTTTCTCGACC
CACCAAGACCGTCCAGCGAGCCTACGGCGGCTCTCTGTGCGCCAACTGTGTCAAGGACCG
AGTTGTTCGAGCTTTCCTCATCGAGGAGCAGAAGATCGTCAAGACTGTTCTCAAGGAGAC
CAGCAAATAAGCATTTCTAGCGGATGTGTAAAAAATTTATTGTAAATCTAGCATGAGCGA
CAACACAGCGAGACAACTGTTGCAAGCAGCCTGTAGAGAATGAGCTACAAGTAACG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05082g_CDS-001

Protein length: 111 aa.
Product: Ribosomal 60S subunit protein L34, putative

>YALI0C05082g_CDS-001 MVQRVTYRRRNGYNTRSNRVKIIKTPGGNLRYLHIKKAAGRPKCGECGIALAGIPTLRPR
ELATVSRPTKTVQRAYGGSLCANCVKDRVVRAFLIEEQKIVKTVLKETSK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG