YALI0C04345g

Overview

Description similar to uniprot|Q04031 Saccharomyces cerevisiae YDR412W RRP17 Component of the pre-60S pre-ribosomal particle
Locus type CDS
Locus tag YALI0C04345g

Location

Species Yarrowia lipolytica Positions 581098..581939
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 842 (nuc.)
Previous locus YALI0C04323g Next locus YALI0C04367g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04345g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04345gYALI0C04345g_mRNA-001YALI0C04345g_CDS-001

Nucleotide sequence

 

>YALI0C04345g
ATGGCCGCCACCAACAGACAGATCTTGACGCAGGGCGACCGGTCATACGCCAAGAAAAAA
ACTAGCCAGTTTGGCGTGGATGAGGTCTCCTACGACGCCGCCAACCGGAAGGAGTACCTG
ACGGGCTTCCGAAAGCGAAAGCTGCAACGAAAGGAAAAGGCGCAAGAGAAGGCCAAGGAG
CAGGCGCGGCTGGACCGGATCGCCGAGCGGAAAAAATTGCGAGACGAAAGAAAAGGTGAC
CAGGAAAAGGAGCGAGCTCGAATGCAGAAGGCCATGAAGGATATCGAGAGAGCTCGATCG
GGCTATTTCAGCACTGACGACGAGAAGGATTCTGATTCTGGCGACGAGTCTGAGGATGAA
GAGGAGGACGAAGAGGAGGACGAAGAGAAGACTTTAAAGAAGTCGAAAAAGTCGTCTAGC
ACTGATGAAGACGACTTCTCCGACTGGGAGGGTATCGATAAGCCCGGAGTGCTCAAGAAG
CAAAAGAAGAAGTACGTGGACGGTCAGGGAAAGAAAACCACGGTGACCATTGAGGCCGTG
TCCCTTGATTCCGATGATGAGGACCAGAACAACACATATGTGGACATGTCCAAGGCTGAC
GAGGTCTTGAAGGAAAGCTTGGACAAGGCTGGTCTGGCCGCTGTCTACTCCGGCATGGCT
GAGCCCAAGGTCAAGAAGCTGGTCAAGAAGACCAAGAAGAAGTTCCGATACCTGTCTTCC
ACTGAACGAAAGAAGAACCTGGACAAGGAGCGAGCTCGAGCCAAGGCCAAGCGAACCAAG
AAGGAGTAGGACACGTTGGACCGTACTGGTAGATAGTTTATTGCATGCATGTATTATAGG
AT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04345g_CDS-001

Protein length: 263 aa.
Product: Component of the pre-60S pre-ribosomal particle, putative

>YALI0C04345g_CDS-001 MAATNRQILTQGDRSYAKKKTSQFGVDEVSYDAANRKEYLTGFRKRKLQRKEKAQEKAKE
QARLDRIAERKKLRDERKGDQEKERARMQKAMKDIERARSGYFSTDDEKDSDSGDESEDE
EEDEEEDEEKTLKKSKKSSSTDEDDFSDWEGIDKPGVLKKQKKKYVDGQGKKTTVTIEAV
SLDSDDEDQNNTYVDMSKADEVLKESLDKAGLAAVYSGMAEPKVKKLVKKTKKKFRYLSS
TERKKNLDKERARAKAKRTKKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG