YALI0C04367g

Overview

Description similar to uniprot|Q12004 Saccharomyces cerevisiae YPR056W TFB4 Subunit of TFIIH complex, involved in transcription initiation
Locus type CDS
Locus tag YALI0C04367g

Location

Species Yarrowia lipolytica Positions 582586..583695
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1110 (nuc.)
Previous locus YALI0C04345g Next locus YALI0C04389g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04367g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04367gYALI0C04367g_mRNA-001YALI0C04367g_CDS-001

Nucleotide sequence

 

>YALI0C04367g
ATGAACGCCATTGATGGAACGTCCCGCCAGCTCAAGGACACGGAGGATCAGACTCTGGAC
GACACGCCGTCGTTGTTGTCGATCATCATTGACGCCCATGTGCCGTCGTGGGAAGAAATC
AAGTCGCAAATATCCATCTCGGAGGCTGTGGCTTCCATTCTCGTCTTCATCAACGCCCAC
TTGGCTCTGCACAACTCCAACAGCGTTAATGTGATTGGATACAACGCCAGTGGTGCTCGA
ATTTTGTATCCTCCTAAAAGCGGCGTTGAATCGACTAGATCAAAGGAGAGAGAAGAGAGA
TCGGAGAGTGTAAGCGATGGAGAACAGGCACCCAGCAAGAAGGACCACTCCATGTACAGA
CAATTCAAGACGGTGGACGAGGTTGTGCAGACGGAGCTGTGGAACATGCTGAACCACACC
AACTACGTGGAGGAGGAGAAACAACACAACTCGGCCATCTCCGGAGCACTGAGTCTAGCT
CTAGGGTTCATAAACAAACATGTGTTTGTGGACGAGTCGAGAATGCGAGCAAGGATCCTG
CTGCTCACCGTCGGACACAAAAACGAAACCATCCAATACATCCCTACTATGAACTGCATT
TTCGCCGCCCAAAAGCTCAAGATCCCCGTCGATGTGTGCAAACTGGGTCCTGGATCCGAC
CAGGTCTTTCTGCAACAAGCATGCGACTCGACACACGGCATCTACATGGATATCAGTGAA
AAGAACTCCAAAACACCCAAGGGTTTGGTTCAGTATCTGCTATCGGGCTTTATCTCAGAC
CCCAGTTTACGACCCCATATTGTGCTGCCCACCCAGTCCAATGTGGACTTTCGAGCAGCA
TGTTTCCTGACTAAACAGGTGGTGGATATTGGCTATGTCTGCTCTGTCTGTCTGTGTATC
ATGAGCCAGATTCCCAGCAACAGAAGATGTCCTACATGCGATACTACCTACTCTGAGAAG
ACTTTGGCTGGTTTGGGTCGAAAACCTCTCAAGAAGAAGAAAAAGAAGGTCGTTAAGCCA
TAGTTGCTATTAGACCGATCCCTAACATGAACCAGTGCGGTTCATATAGCATAGATGTAA
ACATAATGCAATGTATTTGTATAACCCTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04367g_CDS-001

Protein length: 341 aa.
Product: Subunit of TFIIH complex, putative

>YALI0C04367g_CDS-001 MNAIDGTSRQLKDTEDQTLDDTPSLLSIIIDAHVPSWEEIKSQISISEAVASILVFINAH
LALHNSNSVNVIGYNASGARILYPPKSGVESTRSKEREERSESVSDGEQAPSKKDHSMYR
QFKTVDEVVQTELWNMLNHTNYVEEEKQHNSAISGALSLALGFINKHVFVDESRMRARIL
LLTVGHKNETIQYIPTMNCIFAAQKLKIPVDVCKLGPGSDQVFLQQACDSTHGIYMDISE
KNSKTPKGLVQYLLSGFISDPSLRPHIVLPTQSNVDFRAACFLTKQVVDIGYVCSVCLCI
MSQIPSNRRCPTCDTTYSEKTLAGLGRKPLKKKKKKVVKP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG