YALI0C04323g

Overview

Description weakly similar to uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1 similarity to allantoate transport protein
Locus type CDS
Locus tag YALI0C04323g

Location

Species Yarrowia lipolytica Positions 579449..580918
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1470 (nuc.)
Previous locus YALI0C04301g Next locus YALI0C04345g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04323g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04323gYALI0C04323g_mRNA-001YALI0C04323g_CDS-001

Nucleotide sequence

 

>YALI0C04323g
ATGGACGCCGAAAAACTACCCACACCTCTGTCAGGCTCAGAGAACCCTAGTCTCAAGTCG
CAACGAGACCTTGACACAACTTCTCAGAAGTCAGGGACTCTTATCGAAACCAACAGTTTC
AAAAAGCTCCGACGAAACACAACACTAGCCATTTCCGGACAGCTGCAAATGTTCTACGTG
GCCCATCTGGTTGCACGTGACGTTATTGGGCCTGCTCAGGGAGGAAAGCTTCAGGAGTTC
AACCACCTGTCCGATACCCAATTTGAGTGGACTGAGGCTGCCCTGTACTTTCCCTATGCA
ACTTTGGCAGTTCCTCTGGCATTTTTGTTTCTCAGAGTCTCGCCTAGAGTGTTTATTGGT
GTTGAAATGTTCTGTTGGGGTCTGTGCATTGTTCTTCTGGGTCTCTGTACCAATTATGCA
GGGCTGATTTGTGATAGAGCAGTAATGGGAGCATGTATGAGCTTTGCTCTGCCTGCTCTT
CTCCACATGATTTATGAACACCATGGCCGATACGAGGCTCACTTTGTGGTCGGTTGTGTC
TGGGGTGGAAGTTGGTTCATGGTCCCCCTGTTCACTATGCTGGCCATCGCGATTCGTCTC
ATCAATGCAGGCAAACCCGGATGGTCTTGGGACTTTTTTATAGCCGGCCTATGTTCAGTA
GTGTTTGCTCCGGTGGTCTGGTACATGCTCCCTGAGAACTTTTACTCTCCAAAATGGATA
TCGAAGTACGGAGAGCAGGCATTCAACGTCTTCAAGACACTTACTGAAGAAGATTACGGA
GGAGGAAACCCAATTGAACCGACCGAGACACCTCTAGAAGGTCTGATTTCCGCTGCAAAA
GATCCCTTGGTTTGGTTTATCTCCATCCTTGGCTTCTTTACATACTCCTGTTTGGTGTCA
TGCTATGCACAGGTTCAAAGTGCGACTTTTGAAGAGTTGGAGTATACCGCAGCCTTGGGA
CAGTTGATCATATGGACTATTCTCGTGTTTGGTGTCATTTGGTCAAGTTTTCAGGGGTAT
TTGGTTGCCCAGAAAAAAGTTTTGTCCCCGTTTCTGCTCATGAATTATCTCTTCTGCATC
ATTGGATGGGCACTTATTCTGTGCAAGCCTTCAGAACACAACTGGTGGATCAAATTCGGA
GGGGGCTGGTTCACGATTCCTAATGCAACTGCTGCCTTTGCTTCTCTTTGTGGATGGCTG
GGGAGTAATGTTCAGGGCAGAAACAAGCGACTCATGTCCTTCGCCATTTTCTCGTCTGTG
AGCTGCTGGTATGGAGTACTGGTCCTGAGAGTCTTCACCTCAACAGATGGTCCACTCTTC
AAACGGGGATGTTGGATCAACATGGGGTTCATGATCGCTTCGGTATTTGGTACTCTGGGT
ATTGTCTTCTTTCTGAAACGACGACGCATCAGTGGAACAAATCATGCGACCATCAGTGAG
ACCCAGAAGGAGTTTGTGTATATGCTGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04323g_CDS-001

Protein length: 490 aa.
Product: Conserved hypothetical protein

>YALI0C04323g_CDS-001 MDAEKLPTPLSGSENPSLKSQRDLDTTSQKSGTLIETNSFKKLRRNTTLAISGQLQMFYV
AHLVARDVIGPAQGGKLQEFNHLSDTQFEWTEAALYFPYATLAVPLAFLFLRVSPRVFIG
VEMFCWGLCIVLLGLCTNYAGLICDRAVMGACMSFALPALLHMIYEHHGRYEAHFVVGCV
WGGSWFMVPLFTMLAIAIRLINAGKPGWSWDFFIAGLCSVVFAPVVWYMLPENFYSPKWI
SKYGEQAFNVFKTLTEEDYGGGNPIEPTETPLEGLISAAKDPLVWFISILGFFTYSCLVS
CYAQVQSATFEELEYTAALGQLIIWTILVFGVIWSSFQGYLVAQKKVLSPFLLMNYLFCI
IGWALILCKPSEHNWWIKFGGGWFTIPNATAAFASLCGWLGSNVQGRNKRLMSFAIFSSV
SCWYGVLVLRVFTSTDGPLFKRGCWINMGFMIASVFGTLGIVFFLKRRRISGTNHATISE
TQKEFVYML*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG